Dendrobates tinctorius (dyeing poison frog): 141098153
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Entry
141098153 CDS
T11000
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtc03021
]
141098153 (SCAF8)
03041 Spliceosome [BR:
dtc03041
]
141098153 (SCAF8)
Transcription machinery [BR:
dtc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141098153 (SCAF8)
Spliceosome [BR:
dtc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141098153 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
141098153
NCBI-ProteinID:
XP_073441827
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MEAVKTFNSEGRHQGIEVPLYRSSQLYSLNDYKPPISKAKMTQITKSAIKALKFYKHVVQ
SVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQDKDVFAPRFSNNIISTFQNLYRCPAD
DKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPILPSTAAAVGNTPGTPATPV
TPANLVPGIPDPWIAQITSTDTLAAVAQILQSPQGQQLQQLVQSLHVQQQKPQPSLLQAL
DAGLVVQLQALTAQLTAAAAASNALNPLEQSVSFSKKLMDRFDFGDENEDSKKDASQIPL
VPDSMNNSLFHQLAEHLQQQNLEHLRHQFLEQQHTPKMMAQESQDVMSESENSATPSQDD
SHAFMEKEAQLHSSLSLQQEDMDIEEMQDVIEEMFEMEEKKMIKDDKARARSKSRSRSPR
KRRSRSRSGSRKRKHRKRSRSRSRERKHKTSRSYSSERRARDREKERLKKGLPPIQSKTL
SVCSTTLWVGQVDKKATQQDLTNVFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKL
SSGSCKIGSKIIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKLDDLDDFAEGGMIDQ
ETVNNDWQTQKNPEPVAVKEPAPAPVPTTTVQSPIVPKTSIITTQTEVYNPPVAMLQIPV
TPTVPAVSLVPPTFPVSMSVPPPGYTALHPPPFMRAGFNPSQPPPGFIPPPLLPPNIPPP
SMSSAIPTALIPRLATTDSIKDMSYSSLMLPLPSVVTTSVPAPSVFNPSLSTQADNEERR
LPPKDIVNERTATSATLSTVVSSAGILGVQPQSPITAAVPPLTMGGRIAAMPFLDIRPGL
LHQPTAARFALITQAMPPPPPPRSMLHPALIDPTLHSLPFTHGELFPRPTIPSKINNDNL
PSQEEGVAVQSSTIQQERDQDYRFPPADSRETAGQPSGSEQKKEGLPLVSSQSNEVVSSG
ADTDINVRHVEDDHEPQDMAVVDPCEGQDKLVTGSIVGPLSPEASHKGEREAEMPSFEKL
RGPDLHSFERKLKNTPDHHDVPTRPKLDPRNNFSGPPADLILPFGRQPLEIREPFGRPPL
EGRNHFGRPHLEGRDHPGRPHVDGRDHYGRPNPEGRNSVGRLPMDGRELFGRPPLDSRDH
YGRQMPSDIGRREQFPPDKPWGHRGDFDERPHHPFPNFGGPNQFADDRPRHGNYRHEHRN
APGWNRGFESDAHRDYDDRRRSWERHRDRDDREFGFRREMNGNRFGRERQSSNWMPHQPH
NFEYFPEATVTKEKADEVSPMNGEIPETGSQQQTVKSANDPKLCEKETPDKMNEKNEAME
AEVKSQPVVESTETEGT
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaaacctttaacagcgagggccgacatcagggtatagaagtgccccta
tatcgttctagtcagttatactcgctaaatgattacaagccgccgatttccaaggctaaa
atgactcagatcacaaagtctgcaattaaagcgttaaagttctacaagcacgtggttcag
agtgttgagaaatttatccagaagtgtaaacctgaatacaaagttccaggtctctatgtg
atcgactccattgttcggcagtccaggcatcagtttggtcaggataaggatgtttttgct
ccacgattcagcaacaacataattagcactttccagaatttgtatcgctgtccagcagat
gataagagcaagattgtacgagtcctgaacttgtggcagaagaataacgtgttcaagagt
gagattatccaaccactgcttgatatggctgccggtattcctcctcccgtagtcacccct
atcttgcctagtactgccgcagctgttggcaacacgccaggcactccagcaacccctgtt
accccagcaaatctagttccaggcattcctgatccatggattgctcagataacaagtaca
gatactcttgcagcagttgcacagattttacaaagtcctcaaggacagcagcttcagcag
ttggttcagtctttgcatgttcagcaacagaaaccccagccctcactactgcaggctctg
gatgccggcttagtggttcaattgcaggctctcaccgctcagctcacagcagcagctgct
gcctcaaacgctctcaaccccttggagcaaagtgtatctttcagtaagaaacttatggat
cggtttgattttggggatgagaatgaagattcaaaaaaggatgcatcacaaatccccctt
gttccagattctatgaacaattcacttttccatcagcttgcggagcatttacagcagcaa
aatctagagcatctacgtcatcagttcctggagcagcagcatacaccgaagatgatggct
caggagagccaggatgtgatgtctgagtccgaaaattctgctactccttcacaagatgac
agtcatgcctttatggagaaagaggcccagctccatagttctttatcattacaacaagag
gatatggatattgaagaaatgcaagatgtaattgaagagatgtttgaaatggaagagaag
aaaatgattaaagatgacaaagcgagggcccgttccaaatcacgctctagatcacccaga
aaaaggcgttcaagatctcgttctggttcaaggaagcgcaaacatagaaaacgttctcgg
tcaaggtcaagggaaagaaaacataagacttcaaggtcatactcaagtgagcgaagagca
cgagatcgagagaaagaaagactgaaaaaaggcctgcctcctattcaatccaagactttg
agtgtgtgcagcacaacattatgggtgggacaagttgacaaaaaggcgactcagcaagat
ctgaccaacgtatttgaagagtttgggcagattgaatctatcaatatgattcctccccgt
ggttgtgcatatgtttgcatggttcacaggcaagatgcttatcgagctcttcagaagcta
agttcaggatcttgtaagattggatccaaaattatcaagattgcctgggctttaaataaa
ggtgtgaaaacagagtacaagcagttctgggatgttgatcttggtgtcacatatatacct
tgggagaaagtcaagttggatgacttagatgactttgcagaaggaggaatgattgatcag
gagactgtgaataatgattggcagacacagaaaaacccagagccagttgcagtaaaagaa
cctgcacccgctcctgtacctactaccaccgtgcagagtccgattgtccccaaaacatca
ataataacaacacagaccgaggtgtataacccaccggttgcaatgcttcagattcctgta
acaccaactgtgccagctgtaagtttggtaccaccaacgttccctgtgtcaatgtctgtg
ccaccaccgggctatactgctcttcaccctcctccattcatgcgggcaggctttaaccct
tctcagccacctccaggcttcataccgccacctcttctaccacccaatattccaccacct
tctatgagctcagctattccaacagccctgattcctcgactggccacgacggacagcatt
aaagacatgtcctatagcagtttgatgctgcctctaccatcggttgtaaccacttcagta
cctgcgccatctgtctttaatccttctttaagtactcaagccgacaatgaagaaagaaga
ctacctcctaaagacattgtaaatgaaagaacggctacaagtgcaacactaagtacagtg
gtaagcagtgctgggatcttaggagtgcaaccacagtctcctattacagcagctgttcca
cctttaacaatgggcggaagaatagcagctatgccctttttggatattcgtcctgggtta
cttcaccaaccaacagcagcaagatttgctttaataactcaagcaatgcccccacctcca
ccaccaaggagcatgcttcatccagctcttattgatcctactctacattctcttcctttt
acacatggagagctttttccccgtcccactattccatctaaaataaataatgataatctt
ccttctcaagaagaaggtgtcgcagtgcaaagcagtaccattcaacaagaacgagatcaa
gactatcgctttcctcctgcagacagccgtgagactgctggtcaaccctcaggcagtgaa
cagaagaaagagggcttgccattagtttctagccagtcaaatgaagttgtaagctctgga
gcggacactgatattaatgttagacatgtagaggatgaccatgaaccacaggacatggct
gttgttgatccatgtgaaggtcaggacaaacttgttacaggatctattgtaggaccctta
tctccagaagcttcccataaaggtgaaagggaagctgaaatgccttcttttgaaaagctg
agaggtcctgatcttcattcttttgaaagaaagctaaaaaatactcctgatcatcatgat
gttccaacaagaccaaagttagatcccagaaataatttcagtggcccgccagcagattta
atactgccctttggtagacaaccacttgagattagagaaccttttggtagacccccacta
gagggtagaaatcattttgggaggccacacctagagggaagggatcaccctggtagacct
catgtggatggcagagatcattatggacgcccaaatccagagggtagaaactccgttgga
cgtttaccaatggatggtagagaactttttggaaggcctcctttagactcaagagatcat
tatggaagacagatgccatcagatattggtagaagagaacagtttcctccagataaacca
tggggccataggggtgattttgatgaaagaccccatcatccttttcctaattttggtggc
ccgaatcagttcgcagacgacagacctcgtcatggaaattaccggcatgagcacaggaat
gcaccaggttggaacagaggattcgaatctgatgcacaccgggattatgacgaccgtcgt
cgctcttgggaaagacatagggatagggatgatcgagaatttggtttccgcagagaaatg
aatggcaatcgatttggaagagagagacaatcgagcaactggatgccacatcagccacac
aattttgaatatttcccagaggctactgtcaccaaggaaaaagctgatgaggtgtctcca
atgaacggtgaaataccagagactggtagtcaacaacaaactgttaaaagtgcgaatgat
cctaaactgtgtgaaaaggaaacccctgacaaaatgaatgaaaagaacgaggccatggag
gctgaagtaaagagtcaaccagtggttgaaagcacagagactgaggggacataa
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