Dyella thailandensis: ACQVBX_13150
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Entry
ACQVBX_13150 CDS
T11632
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dtd Dyella thailandensis
Pathway
dtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQVBX_13150 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtd03021
]
ACQVBX_13150 (rho)
03019 Messenger RNA biogenesis [BR:
dtd03019
]
ACQVBX_13150 (rho)
Transcription machinery [BR:
dtd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACQVBX_13150 (rho)
Messenger RNA biogenesis [BR:
dtd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACQVBX_13150 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
FtsK_SpoIIIE
Mor
Motif
Other DBs
NCBI-ProteinID:
XUQ30805
LinkDB
All DBs
Position
2841713..2843533
Genome browser
AA seq
606 aa
AA seq
DB search
MSDIESKEPNDASSAESRPAGETRQRAPRKSAAKTDKPAAAAPASSEAPRTAPVPEQGSL
PVDRGNERAPAERPAPAADGNSRPAPEAREGNSSSGQTGGGNPAPQNGNQSGQGGQNQGA
QNQGGQGGGNGEPRRNDRNDRNDRGRRRRHERGQRGNQGGGGGGQRNPNGLPMDDDETGD
VGSNDRLINLTELKRMKAPQLLAFAESLGIQEGVARQRKQDVIFNILKAHARSGGGIWAE
GVLEILQDGFGFLRSADESYLAGPDDIYVSPSQIRRFNLRTGDYITGRVRHPKEGERYFA
MLRVDDINGDPPEASKNKMLFENLTPLFPRKAFKLERGNGSSEDITGRILDLIAPIGRGQ
RGLIVSQPKSGKTMMLQNIAQAITYNHPDAHLIMLLIDERPEEVTEIARTVRAEVISSTF
DEPAVRHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDAN
ALQRPKRFFGAARNVEEGGSLTIIATALTDTGSKMDEVIYEEFKGTGNMEVHLSRRISEK
RVYPAIDINRSGTRREDLLIDPDLLAKIWILRKLLHPMDELAAMEFMLDKMKSTKSNDEF
FNSMKR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatatcgaaagcaaagaacccaacgacgcatcgagcgccgagtcccggcctgcg
ggtgaaacgcgccagcgtgcgccacgcaagtccgccgccaagacggacaagcctgcggcg
gcggctccggcctcaagcgaagcgccccgcaccgcgccggtacccgagcagggcagcctg
ccagtggaccgcggcaacgagcgcgcgccggccgagcgccccgccccggcggcggacggc
aacagccgtcccgcccccgaagcccgcgagggcaattcctccagtgggcagacgggcggc
ggcaatccggcgccgcagaatggcaaccagagcggtcagggcggccagaaccaaggggcc
cagaatcagggcggccagggcggcggcaacggcgagccccgtcgcaacgatcgcaatgac
cgcaacgatcgcggccgccgccgtcggcacgagcgtggccagcgcggcaaccagggcggt
ggtggtggcggccagcgcaacccgaacgggctgccgatggatgatgacgagaccggcgac
gtcggcagcaacgaccgcctgatcaacctcaccgaactcaagcgcatgaaggcgccgcag
ctgctggccttcgccgagtcgctgggcatccaggagggcgtggcgcgccagcgcaagcag
gacgtgatcttcaacatcctcaaggcgcacgcccgttccggcggcggcatctgggccgag
ggcgtgctggagatcctgcaagacggcttcggcttcctgcgttcggccgacgagagctac
ctggccggccccgacgacatctacgtcagtcccagccagatccgccgcttcaacctgcgc
accggcgactacatcaccgggcgcgtgcgccatccgaaggaaggcgagcgctacttcgcc
atgctgcgcgtcgacgacatcaacggcgatccgccggaagcgtcgaagaacaagatgctg
ttcgagaacctcacgccgctgttcccgcgcaaggcgttcaagctcgagcgcggcaacggg
tcgagcgaggacatcaccggccgcatcctggacctgatcgcgcccatcggccgcggccag
cgcggcctgatcgtctcccagcccaagtcgggcaagacgatgatgctgcagaacatcgcc
caggcgatcacctacaaccatcccgacgcgcacctgatcatgctgctgatcgacgagcgc
ccggaggaagtgaccgagatcgcccgcaccgtgcgcgccgaggtcatcagctccaccttc
gacgaaccggccgtgcgccacgtgcaggtggccgagatggtgatcgagcgggccaagcgc
ctggtcgagcacaagaaggacgtggtgatcctgctcgactcgatcacccgcctggcgcgc
gcctacaacaccgtggtgcccagctccggcaaggtgctcaccggcggcgtcgacgccaac
gcgctgcagcgtcccaagcgcttcttcggcgccgcgcgcaacgtcgaggaaggcggcagc
ctgaccatcatcgccaccgcgctgaccgacacgggcagcaagatggacgaggtgatctac
gaggagttcaagggcaccggcaacatggaagtgcacctgtcccgccgcatctccgagaag
cgcgtctacccggcgatcgacatcaaccgctccggcacccgccgcgaagacctgctgatc
gacccggacctgctggcaaagatctggatcctgcgcaaactgctgcacccgatggacgag
ctggccgcgatggagttcatgctcgacaagatgaagagcaccaagtccaacgacgagttc
ttcaactcgatgaagcgctga
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