Dyella thailandensis: ACQVBX_16650
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Entry
ACQVBX_16650 CDS
T11632
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dtd Dyella thailandensis
Pathway
dtd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dtd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQVBX_16650 (polA)
03410 Base excision repair
ACQVBX_16650 (polA)
03420 Nucleotide excision repair
ACQVBX_16650 (polA)
03440 Homologous recombination
ACQVBX_16650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtd03032
]
ACQVBX_16650 (polA)
03400 DNA repair and recombination proteins [BR:
dtd03400
]
ACQVBX_16650 (polA)
Enzymes [BR:
dtd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQVBX_16650 (polA)
DNA replication proteins [BR:
dtd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACQVBX_16650 (polA)
DNA repair and recombination proteins [BR:
dtd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACQVBX_16650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACQVBX_16650 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
PA1414
Motif
Other DBs
NCBI-ProteinID:
XUQ31468
LinkDB
All DBs
Position
complement(3660375..3663122)
Genome browser
AA seq
915 aa
AA seq
DB search
MAKLILIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKEQPTYMAFVSDASG
PNFRNDMYADYKANRPPMPDDLRAQVQPMLDIVAALGFPILRVDGVEADDVIGTLALEAQ
RQGIEVEISTSDKDFAQLVRPGITLVNTMTSTVTDRDGVIAKFGVPPEQIIDFLALTGDS
IDNVPGVAKCGPKTAAKWLAEYGSLDGLIAGADKVGGKIGENLREALGQLPLSRDLVTIK
TDVALDLGVTDLAPRAKDVDALRTLFTRYEFKQALKELDGSNAPAGAHPVRDAPAPAAVE
EPRAQGALLHEDNSPGSYELVTTPAQLDAWLAKLEQAELIAFDTETTSLDAMQAEIVGAS
FAVETGHACYIPLAHDYPGAPAQLDRAATLAALKPILENPARPKLGQHAKYDMNVLSQYG
ITVQGLKHDSMLESYVWNATATRHDMDSLAKKYLGYETIKYEQVAGKGAKQISFSQVDLE
TARDYAAEDADVTLRLHHALWPKLESEPALRKVYEEIEIPLVPVLAKMEQRGVLIDANVL
RLQSQQLGKRMHEIQQQAFGEAGREFNLDSPKQLQAILFDELGLAAKVKTPTGQPSTNEE
ALEAIADEHALPRLILDYRGLAKLRSTYTDKLSGMVNPRTGRVHTSYHQGAVATGRISSS
DPNLQNIPVRTEEGRRIRQAFIAPEGWRVMAADYSQIELRIMAHLSGDEGLLKAFQEGGD
VHRATAAEVFGLPPEQVSANQRRAAKAINFGLMYGMSAFGLARQLGVDRGEASDYMARYF
SRYPGVHAFMEATRSQAHRDGYVQTIFGRRLYLENLNARNQALRQGAERAAVNAPMQGSA
ADIIKRAMIAVDGWLVGRDDARMLMQVHDELVFEVRADAVDAVRAGVVQRMSGAAELKVP
LLVDVGVGANWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctcatcctgattgacggttcctcctatctctaccgcgccttccacgcgctg
ccgccgctgaccaacgcgcagggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgcgcgccacgctgaaggagcagccgacctacatggccttcgtcagcgacgcgtcgggc
ccgaacttccgcaacgacatgtacgccgactacaaggctaaccgcccgccgatgccggac
gatctgcgcgcgcaggtgcagccgatgctcgacatcgtcgccgcgctgggctttccgatc
ctgcgcgtggacggggtggaggcggacgatgtgatcggcaccctggcgctcgaagcccag
cgccagggcatcgaggtggagatctccaccagcgacaaggattttgcccagctggtgcgc
cccggcatcaccctggtcaacaccatgaccagcacggtgaccgaccgcgacggcgtgatc
gccaagttcggcgtgccgccggagcagatcatcgatttcctggcgctcaccggcgacagc
atcgacaacgtgcccggcgtggccaagtgcggcccgaagacggccgccaagtggctggcc
gaatacggctcgctggacggcctgatcgccggcgccgacaaggtcggtggcaagatcggc
gagaacctgcgtgaggcactgggccagctgccgctgtcgcgcgatctggtcaccatcaag
accgacgtggcgctggacctgggcgtcaccgacctcgcgccgcgggcgaaggacgtcgac
gccctgcgtacgctgttcacccgctacgagttcaagcaggcgctcaaggagctggatggc
agcaatgccccggcaggagcgcaccctgtgcgcgacgctcctgctcctgctgcggtggaa
gagcctcgcgcacaaggtgcgctcctacatgaggacaactcgccgggaagctacgagctg
gtcaccaccccggcacagctggacgcctggctggccaagctggagcaggccgagctgatc
gccttcgacaccgaaaccaccagcctggatgcgatgcaggcggagatcgtcggcgcctcg
ttcgcggtggagaccggccacgcctgctacatcccgctggcgcatgactaccccggcgcg
cccgcgcagctcgatcgcgccgccacgctggcggcgctgaaacccatcctggaaaacccc
gcgcgacccaagctcggccagcacgccaagtacgacatgaacgtgctgagccagtacggc
atcaccgtgcaggggctcaagcacgattccatgctcgagtcctacgtgtggaacgccacc
gccacgcgccacgacatggactcgctggcgaagaagtacctcggctacgagacgatcaag
tacgagcaggtcgccggcaagggcgccaagcagatctccttctcgcaggtggacctggag
accgcgcgcgactacgccgccgaggatgccgacgtcaccctgcgcctgcaccacgcgctg
tggcccaagctggaaagcgaaccggcgctgcgcaaggtgtacgaagagatcgagatcccg
ctggtgccggtgctggcaaagatggagcagcgcggcgtactgatcgacgccaacgtgttg
cgcctgcaaagccagcagctgggcaagcgcatgcacgagatccagcagcaggcgttcggc
gaagcgggtcgcgagttcaacctcgattcgcccaagcaactgcaggcgatcctgttcgac
gagctgggcctggccgccaaggtgaagacacccaccggccagccctccaccaacgaggag
gcgctggaggcgatcgccgacgagcacgcgctgccgcgcctgatcctcgactaccgcggc
ctggccaagctgcgctccacctacaccgacaagctgtcgggcatggtcaatccgcgcacc
gggcgcgtgcacaccagctaccaccagggcgcggtggcgaccgggcgtatttcctcgtcc
gacccgaacctgcagaacatcccggtgcgcaccgaggagggtcggcgcatccgccaggcc
ttcatcgcgccggaaggctggcgggtgatggcggcggactattcgcagatcgagctgcgc
atcatggcccacctgtccggcgacgagggcctgctcaaggcgttccaggagggcggggat
gtgcatcgcgcgaccgcggccgaagtattcggcctgccgccggaacaggtcagcgccaac
cagcgccgcgccgcgaaggcgatcaacttcggcctgatgtacggcatgagcgcgttcggc
ctggcgcgccagcttggggtggaccgcggcgaagccagcgactacatggctcgctacttc
tcgcgctacccgggcgtgcacgcgttcatggaagccacccgctcgcaggcgcatcgcgat
ggctacgtgcagacgatcttcggccgtcgcctgtacctggagaacctcaacgcccgcaac
caggcgctgcgccagggcgccgagcgcgccgcggtgaacgcgccgatgcagggcagcgcg
gccgacatcatcaagcgcgccatgatcgcagtggacggctggctggtcggtcgcgacgac
gcccgcatgctgatgcaggtgcacgacgaactggtgttcgaggtgcgcgccgacgcggtg
gacgccgtgcgcgctggcgtggtccagcgcatgagcggcgcggccgagctgaaggtgccg
ctgctggtggacgtgggcgtgggcgcgaactgggacgaggcgcactga
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