Desulfurobacterium thermolithotrophum: Dester_0097
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Entry
Dester_0097 CDS
T01427
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dte
Desulfurobacterium thermolithotrophum
Pathway
dte03420
Nucleotide excision repair
dte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dester_0097
03430 Mismatch repair
Dester_0097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dte03400
]
Dester_0097
Enzymes [BR:
dte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dester_0097
DNA repair and recombination proteins [BR:
dte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dester_0097
MMR (mismatch excision repair)
Other MMR factors
Dester_0097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
PcrA_UvrD_tudor
DEAD
ResIII
PI_PP_C
PriX
Motif
Other DBs
NCBI-ProteinID:
ADY72755
UniProt:
F0S0V1
LinkDB
All DBs
Position
85408..87525
Genome browser
AA seq
705 aa
AA seq
DB search
MESLLKGLNPQQKKAVTYFDSPLLILAGAGSGKTRVITYKIAYMIEKLRYKPERILAVTF
TNKAAKEMKERVEKLVGNSAPVLVSTFHSFCVRLLRTHSVRVGYQPNFLILDTDDKKRLV
REIIRDMNLDSELYNPSAIASVISNIKNGLYSPESMTTYYDRIKDIFEIYNKRLKENNAF
DFDDLLIYGRELLKSEELQRKYSDFFQYVLIDEYQDTNRIQYEIARALTKDKGNICVVGD
EDQCIYTWRGANIENILSFEKDFQNAKIIKLEKNYRCTKVILDAANAVIENNKLRKGKKL
YTDNPAGEPIRLYVAESDVDEARFVSKTVKQFLKKGVKPADIAIFYRTNSQSRVVEDALR
REGISYKIVGGLKFYERKEIKDIIAYLRVVLFEKDTISLLRILNVPKRGLGSAVEKKLKE
ILQQETSNIGALKLLSDELRMEKQKKAIEDLIDIVEEIRKKLYNLKPYDLIKFITVSIGY
EKYLRKEHPEDWESRVENIKELGNTIQEFSEREKLQGEDLYLEFLSTITLSSDQDELDEE
DEKVTLMTVHASKGLEFPIVFITGLEEGLFPHIKSLDTKEEIEEERRLFYVAITRAKRLL
SLSYAKKRRSFGSYKDTRKSRFLDEVPTHLIKEVKRKVAKKESERRNAIDFEVVQKKKPK
LVFHQKFGKGVVKRVEGVGESAKVTAFFANYGEKTIVMKFLKVIG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttggagagtttattaaaaggtttaaatcctcagcaaaagaaagcagtaacttattttgat
tctcctcttttaatcttagcaggagcaggttctgggaagacaagagtcattacatataag
attgcctacatgattgagaaattaagatataaacctgaaagaattctggcagttacattt
acaaataaagctgctaaagaaatgaaagaaagagtggagaagttagttggaaattcagct
ccagttcttgtatctacttttcactctttttgtgtaagacttttaagaactcacagcgta
agagttggttatcagccaaactttttaattcttgatacagatgacaaaaagagattagta
agagaaataataagggacatgaaccttgattctgaactctacaatccttcggccatagca
tctgttataagcaacataaaaaatggcctttattctccagagagtatgaccacttattac
gatagaatcaaagatatatttgaaatttacaacaaaagactgaaggaaaataacgctttt
gactttgatgacttgctgatttatggaagagagcttttaaagagtgaagaactccaaaga
aagtattctgactttttccagtacgttctcatagatgagtaccaggatacaaacagaatt
cagtatgagattgcaagagctctaacaaaggataaagggaatatctgcgttgtaggagat
gaagaccagtgtatttacacgtggcgaggagcaaatatagaaaacattctttcatttgaa
aaagactttcaaaatgcaaaaataataaagcttgagaaaaactatcgttgtacaaaggta
atccttgatgctgcaaatgcagtaattgaaaataacaagctgagaaagggaaaaaaactt
tacacagacaatcccgcaggagaaccaataagactttacgttgcagaaagtgacgttgat
gaggcaaggtttgtttcaaaaacggttaaacaatttttgaaaaagggagtaaagccagct
gacattgctattttttatagaacgaactcacaatcaagggtagttgaagacgctttaaga
agggaaggcatatcttataaaattgttggcgggttaaagttttacgaaagaaaggaaatt
aaagacattatagcctatttaagagtggttttatttgaaaaggatactatttctctcctt
cgaattttgaatgttcctaaaagaggactaggctctgccgtagaaaagaaattgaaagaa
attcttcaacaggaaacttctaatattggagctttaaagcttctttctgatgaattgaga
atggaaaagcaaaaaaaggcaattgaggacttgatagatatagttgaggaaattagaaaa
aagctttataacctaaaaccttatgatcttattaagttcatcactgtttcaatagggtat
gagaagtatcttcgaaaagagcatccagaagattgggaatctagagttgaaaacataaaa
gagcttggtaacacaattcaagagttttcagaaagagaaaaacttcaaggagaagatctt
tacttagagtttttaagcacgattactctttcttctgaccaggatgagttagatgaagaa
gatgaaaaggttactctcatgaccgttcacgcttcaaaaggtttggaatttcccattgtc
tttatcacaggacttgaagaaggtcttttccctcacataaaaagtcttgatacaaaggaa
gagatagaagaggaaagaagacttttttacgttgcaataacaagagctaaaaggctcctt
tctctttcctatgctaaaaagaggagaagttttggaagttataaggatacgagaaagtca
aggtttttagatgaagtcccgacacatctaattaaagaggtaaaaagaaaagttgctaaa
aaagaaagtgaaagaagaaacgctattgattttgaagttgtccagaagaaaaaacctaaa
ttagtatttcatcaaaagtttggaaaaggagtagtaaagagagtagaaggagttggagaa
agtgcaaaagtgactgctttttttgctaattatggagaaaaaacaatagtcatgaagttt
ttaaaagtaattggataa
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