Desulfurobacterium thermolithotrophum: Dester_0222
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Entry
Dester_0222 CDS
T01427
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dte
Desulfurobacterium thermolithotrophum
Pathway
dte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dester_0222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dte03021
]
Dester_0222
03400 DNA repair and recombination proteins [BR:
dte03400
]
Dester_0222
Enzymes [BR:
dte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dester_0222
Transcription machinery [BR:
dte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dester_0222
DNA repair and recombination proteins [BR:
dte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dester_0222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
RAD51D_N
Calmod_bind_M
TmoB
Rrn6_HB
DUF3701
Motif
Other DBs
NCBI-ProteinID:
ADY72879
UniProt:
F0S1E8
LinkDB
All DBs
Position
200208..201164
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AA seq
318 aa
AA seq
DB search
MVEFITPEKFLWEEHTENYGRFVVEPLEKGYGTTVGNALRRVLLSSIEGAAPTAVKFEGA
YHEFTTLPGVVEDVTEIVLNLKQLRFILHGEGPVFIELKKRGPGKVYAKDFELPSQVELL
TPDQEIATLDNENSEIEIYLRIDKGKGFVLSEDIQEIFDISTIGWIPLDADFSPIKKVAF
RVEDTRVGRRTDYNRLTMEIWTDGSITPKDAVVRAANILIEHFSMVRDKLVEAIFATAQP
EEVKKEEVPEIYNQTLEEAGLKGRALKILGENGITTVGDLVKLTKKELESMKGLGKKSLA
EIENFLASLGFELGGGQK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatttattactcctgagaagtttctctgggaggaacatacagaaaattatgga
agatttgttgtagaacctttggaaaagggttatggtactactgttggtaatgctttgagg
agagtacttctttcttctatagaaggtgctgctccaactgctgttaagtttgaaggggct
tatcacgaatttacaactcttcctggagttgtcgaggatgtaacagaaatagtcctcaat
cttaagcagcttagatttattcttcacggggaaggtcctgtttttatagaactcaagaaa
agaggacctggaaaagtatatgcaaaggattttgaacttccatctcaagttgagctctta
actcctgaccaagaaatagcaactcttgataatgaaaattcagaaatagagatttacctt
agaatagacaaaggaaaaggttttgttttatctgaggatattcaagaaatctttgacatt
tctacaataggttggatacctcttgacgcggatttttctcctattaagaaagttgcgttt
agagtagaagatacgagggtaggaagaaggactgactacaacagactcactatggaaata
tggacagatggtagtattactccaaaagatgctgttgttagagctgctaatattcttata
gaacacttttctatggttagggataagcttgttgaggctatttttgctacagctcaacct
gaagaggttaaaaaagaagaagtaccggaaatttacaatcagactctcgaagaagctggt
ttaaagggtagagctctcaagatcttaggagaaaatggaataacaacagttggagactta
gtaaaactaaccaaaaaagaacttgagtctatgaaaggactcggaaagaagtctttggct
gaaattgagaatttcttggcttcccttggatttgaacttggaggtggacaaaaatga
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