Desulfurobacterium thermolithotrophum: Dester_0922
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Entry
Dester_0922 CDS
T01427
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dte
Desulfurobacterium thermolithotrophum
Brite
KEGG Orthology (KO) [BR:
dte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dte03016
]
Dester_0922
Enzymes [BR:
dte01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Dester_0922
Transfer RNA biogenesis [BR:
dte03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Dester_0922
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
RRP36
Motif
Other DBs
NCBI-ProteinID:
ADY73562
UniProt:
F0S3Z0
LinkDB
All DBs
Position
complement(927511..928059)
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AA seq
182 aa
AA seq
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MAKKRLFIGTLTTVSGIEAVKERIELLGILGKWVEKENIHFTYRFLGDIEEERIPQIKQM
LKNKLKGITAPMVTYKGLDVFPNLKSPRVLWIGMKSEEIEEVKRKIDQALMPFGFSPEKI
FKPHLTLLRIKKLRHATKFKSYLFQMKEHFFDKKVEQKVCLIESKLTSKGPIYKVLEEII
LD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaacggcttttcattggaactcttactactgtttcaggtatagaagctgtt
aaagaaagaatagagctcttaggaattttaggaaaatgggtagaaaaggaaaatatacat
tttacttatagatttttgggagatattgaagaagaaaggattcctcaaattaaacaaatg
ttaaaaaacaaactaaaaggaataactgctcctatggtcacttataaaggacttgacgtt
ttcccaaatttgaaatctccaagagttctttggattggaatgaaatcagaggaaattgaa
gaagtaaaaagaaaaatagatcaggctttaatgccttttggtttttcacctgagaaaatt
tttaaaccacatctaacacttttaagaataaagaaattaaggcatgcaacaaagtttaaa
agctatctttttcaaatgaaagaacacttttttgataaaaaagttgaacaaaaagtgtgt
ctaattgaaagtaaactaacttcaaaaggccctatttacaaagttttagaggagataatc
cttgattga
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