Dictyoglomus thermophilum: DICTH_0830
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Entry
DICTH_0830 CDS
T00774
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dth
Dictyoglomus thermophilum
Pathway
dth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DICTH_0830 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dth03021
]
DICTH_0830 (rpoB)
03400 DNA repair and recombination proteins [BR:
dth03400
]
DICTH_0830 (rpoB)
Enzymes [BR:
dth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DICTH_0830 (rpoB)
Transcription machinery [BR:
dth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DICTH_0830 (rpoB)
DNA repair and recombination proteins [BR:
dth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DICTH_0830 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
ISN1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ACI18349
UniProt:
B5YDT6
LinkDB
All DBs
Position
835063..838275
Genome browser
AA seq
1070 aa
AA seq
DB search
MKGKNFKTEIFWSDSRPVFQNIPDLLKIQYDSFNWFLTQGLREVLDEINPIESVRQGLSL
EFVTTEDGIKIDPPTKTPDECLEKGLTYESSIYVKTRLYFKDENRNIKDIKEQMVFLGNI
PQMTNRATFIVNGTEKVIVNQITRSPGVFFQEEGHSIIATLIPTRGGWIEFELDSNGIIY
IHPNGMKKFPVSLLLRALGYDLDYFSEILGPEELNYLEMTYAKDNVNDRSQAIFEACAKL
RPGDVPSREEDALRVIKQMFFDVRRYNLGKVGRYKLNQRLGLNIPLDNYALTEDDLIEII
KRLTMVKTGKDETDDIDHLGNRRIRSVGELLQMQFRAGLARVEKLIREKMALTDPEQASP
IALVSTRPLMAAVKEFFNRNPLSQFMDQTNPLSELAHKRRISALGPGGLTRERATFEVRD
IHPSHYGRVCPIETPEGPNAGLINYLSTLAIVDEYGFLRTPYYRVKDGKITDEIVYLSAT
EEDKYTIASFDVHINENREIVDELIHARRKGKFVLCSPKEVDFVGVSPYQTVSISTALIP
FLEHDDANRALMGANMQRQAVPLINTEPPLVGTGIEETVARNTGVMVISDVDGIVKKVSS
SEIVIETDNKEEKRYQLIKYRRTNQGTCWNQKPIVEVGQRVKKGDVLADGPATSNGKLAL
GRNVLVAFMPWGGYNYEDAIIISERLVKEDIFTSIHIEEYEIKARDTKLGPEEITRDIPN
ISEDAIRYLDKDGIIMIGAEVGPNDILVGKVTPKGETELTPEERLLRAIFGEKSRETKDT
SLRMPHGEWGKVIDVKVLSRENDDELPPGVNKIVKVRVAQIRKISVGDKLAGRHGNKGVI
ATILPEEDMPFLEDGTPVDIILNPLGVPSRMNVGQILETHLGWAAKELGLYAIVPPFDEV
LGENRSANLVKEMLRKAGLPEDGRVVLYDGRTGEPFNQKVTVGYMYILKLIHLADDKIHA
RSVGPYSLVTQQPLGGRAQFGGQRFGEMEVWALEAYGAAHTLEEMLTYKSDDVAGRTEAY
SAIVSGNLIKEPGIPESFKVLVRELQGLGIKVSAYIGNRLVNLYKIEDES
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtaaaaatttcaaaacagaaatcttttggagtgatagtaggcctgtatttcaa
aatatcccagatttattaaaaatacaatatgattccttcaactggtttttaactcagggt
cttagagaggttcttgatgaaataaatcctatagaatcggtacgtcaaggactatcttta
gaatttgttactactgaggacggtataaagattgatccgcctacaaaaacccctgatgaa
tgtttagaaaaaggtcttacttatgaatcctcaatttatgtaaagacaaggttgtatttt
aaggatgagaataggaatatcaaagatattaaagaacagatggtttttcttggaaatatt
cctcaaatgactaatagagccacctttattgtaaatggtacagaaaaggttatagttaac
caaatcacaagatcgcctggagtatttttccaggaagagggacatagtattattgcaact
cttatacctacaaggggtggctggatagagtttgaattggatagtaatggtattatctat
attcatcctaatggaatgaaaaaatttcctgtatctcttttacttagggctttaggttac
gatttggattatttctctgaaattttaggaccagaagagttgaattacttggaaatgacc
tatgcaaaagacaatgtaaatgatagatcacaagcaatttttgaggcttgtgcaaagtta
agacctggggatgttccaagtagagaagaggatgcattaagagtaataaaacaaatgttt
tttgatgttagaagatataacttgggtaaagttggaagatataaattaaatcagagattg
ggattaaacattccccttgataactatgctcttacagaagatgatttaatcgaaataata
aaaaggctgacaatggttaaaacaggcaaagatgagacagatgatatagatcaccttggt
aatagaagaataagatctgtaggagaactcttgcagatgcaatttagggctggacttgca
agggtagagaagttgataagagagaagatggctttaacagatcccgaacaagcaagtcct
attgctttagtaagtactagacctttgatggcagcagttaaagaattctttaatagaaac
ccactctcccaatttatggatcaaactaaccctctttcagagctcgctcataagagaaga
ataagtgctctgggccctggaggtttaactcgtgaaagagcaacatttgaagtaagagat
attcatccttctcattatggaagggtttgtccaatagaaactccagagggccctaatgca
ggtttaataaactatttatccactttagctatagttgatgaatatggattcttgagaaca
ccttattacagagtaaaagatggaaaaattacagatgaaattgtgtatctatcagccaca
gaagaagataaatataccatagcatcctttgatgttcatattaatgaaaatagagaaata
gttgatgagctaattcatgcaagaagaaaaggaaagtttgtactttgttctcctaaagaa
gtagatttcgtaggagtatcaccatatcaaacagtaagtatttctactgctttaattcct
ttccttgaacatgatgacgcaaacagagctcttatgggagcaaatatgcagcgtcaagca
gtaccattgataaatacagagcctcccttagtggggacaggaattgaagaaactgtagca
agaaatacgggagttatggtcatatctgacgtagatggtatagttaaaaaagtatcgtcc
tcggagattgtgatcgaaacagataataaagaagagaagaggtatcaacttataaagtac
agaagaacaaatcaagggacttgttggaatcaaaagccaatagttgaagtaggacaaagg
gttaaaaaaggagatgttttagctgatggtccagcaacttctaatggaaaacttgcttta
ggtagaaatgtgcttgtagcatttatgccatggggtggctataactatgaggacgcaata
ataataagtgaaagattagttaaggaggatatatttacgtctattcatatcgaagaatat
gagataaaagcaagagatacaaaacttggtcctgaggaaataactagggatataccaaat
ataagtgaagatgccataaggtatttggataaagatgggataataatgataggtgcagag
gttggtcctaatgatattttggtaggaaaggtcactccaaaaggtgaaaccgaacttact
cctgaggaaaggctattgagagcgatttttggagaaaagtctcgtgaaactaaggataca
tctttgaggatgcctcatggtgagtggggtaaggtcatagatgtaaaagttttgagcaga
gaaaatgacgatgaacttcctccaggagtaaataagattgtaaaagttagagttgctcaa
ataagaaaaatttcggtaggagataagttggcaggaaggcatggtaataagggtgtaatt
gcaaccatattaccagaggaagatatgcccttccttgaagatggtactccagtagacata
atattaaatccattaggagtgccgtctcgtatgaacgtgggacaaattttagaaacccat
ttgggatgggcagctaaagaattaggtttatatgctatagtacctccctttgatgaagta
ttgggagaaaatagatctgctaatttagtgaaggagatgctgagaaaagcagggcttccc
gaggatggtagggtggttctatatgatgggagaactggggagcctttcaaccaaaaagtt
actgtaggatatatgtacattttgaaattaattcatcttgcggatgataagattcatgca
agatctgttggaccttattctctcgttactcagcagcctcttggtggaagagctcaattt
ggtggtcagagatttggagaaatggaggtatgggccttggaggcttatggcgcagctcat
actctggaagagatgttaacatataaatctgacgatgtggctggaagaaccgaggcttat
tctgctattgtttctggtaacttgataaaagaaccaggtattccggaatcctttaaagtt
cttgttagagaattacaaggattaggtattaaggtatctgcctatatcggaaatagattg
gttaatctttataaaattgaagatgaatcttaa
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