Dictyoglomus thermophilum: DICTH_0947
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Entry
DICTH_0947 CDS
T00774
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dth
Dictyoglomus thermophilum
Pathway
dth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICTH_0947 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dth03021
]
DICTH_0947 (rho)
03019 Messenger RNA biogenesis [BR:
dth03019
]
DICTH_0947 (rho)
Transcription machinery [BR:
dth03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DICTH_0947 (rho)
Messenger RNA biogenesis [BR:
dth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DICTH_0947 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
ATPase_2
OB_RNB
AAA_22
AAA
YabA
SAP_new25
DUF5855
Motif
Other DBs
NCBI-ProteinID:
ACI19430
UniProt:
B5YE47
LinkDB
All DBs
Position
936782..938200
Genome browser
AA seq
472 aa
AA seq
DB search
MSYEDLVLKTRAELVEIARELKIPGYYRMTKEEMIEAISRKLEEGGEISELSKDRVSSVV
TEKEEVEEKEATVEEKVEEKKEEKQEQKDKVIIDGFECIYREGYLEITEDGYGFIRKNFK
PSDEDVYISASQIKKFGLRYGDLIGGMVRPPKENERWYAILRIDTVNGRDLMHSRQRPKF
DDLIPYHPTERLKLETTPDEVDTRLIDLLAPIGKGQRGLIVSPPKAGKTTLLKKIANGIS
ANHKEVKLFILLIDERPEEVTDFRRSVQGEVIGSTFDEPPERHIQVAKLVLERAKRLVEY
GEHVVILLDSITRLARAYNWAVPSSGRTLSGGVELAALHHAKEFFGAARNIEDGGSLTIL
ATALIETGSRMDDVIFEEFKGTGNMELVLDRKLADRRIFPAISISRSGTRKEELLYPEDQ
LRKIWFLRRTLIGQEEGEAIEGLKRMLRETRNNEEFLRVIDGIIKKSNTIRR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgaggatttagtactcaaaactagagcagagttggtagaaatagccagagaa
ttaaaaatacctggttattatcgtatgacgaaagaagaaatgatagaggctattagtagg
aagttagaagaggggggagaaatttctgaactatctaaagatagagtttcttctgttgtt
accgaaaaagaagaggtagaagaaaaagaagcaactgttgaggaaaaagttgaagaaaaa
aaggaagaaaagcaggagcaaaaggataaggttattattgacggttttgaatgtatatat
agagagggctatttggaaatcacagaagatggttatggctttattaggaaaaattttaag
cccagtgatgaagacgtatatatttccgcctcacagattaaaaaatttggtttaagatat
ggagacttaattggaggaatggtacgtcctccaaaagaaaatgaaagatggtatgctatt
ctaagaattgacactgtaaatggaagagatttaatgcattcgagacaaaggcctaaattt
gatgatttaattccttatcatcctactgaaagattaaagcttgagactactcctgatgag
gtagatacgagactaatagatcttcttgctcctataggaaagggtcaaagaggattgatt
gtttctccaccaaaagctggtaagactactttattaaagaaaatagcaaatggaatatct
gcaaatcataaagaggtaaaattatttatcctactaatagatgaaaggcctgaagaagtt
acagatttcagaagatcagttcaaggagaggttattggttctacttttgatgaaccacct
gagaggcatatccaagtagctaagcttgtattagagagagctaagaggcttgtagagtat
ggcgaacatgtggtaattttacttgacagtattacaagattagcaagagcttataactgg
gctgtaccttctagtggtaggactctttcgggtggagtcgaacttgcagccctacatcat
gcaaaggagttttttggagctgcaagaaatattgaagatggcggtagtttaactattctt
gctacagctttaatagaaacaggaagtagaatggatgatgtcatttttgaagagttcaaa
ggtactggaaatatggaactggttttagataggaaacttgctgatagaagaatctttcct
gcaataagtatatcaaggtctggtacaagaaaggaagaattattgtatcctgaagatcag
ttaagaaagatatggttcttaagaagaaccctaataggtcaagaagagggagaggcaata
gaagggcttaagagaatgcttagagagacgagaaataatgaagaatttttaagggttatt
gacggaataattaagaagagtaatactattagaagatag
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