Desulfomonile tiedjei: Desti_0528
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Entry
Desti_0528 CDS
T02147
Name
(GenBank) helicase, putative, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dti
Desulfomonile tiedjei
Pathway
dti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desti_0528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dti03400
]
Desti_0528
Enzymes [BR:
dti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Desti_0528
DNA repair and recombination proteins [BR:
dti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desti_0528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
Viral_helicase1
AAA_11
HHH_5
HHH
PIF1
AAA_22
nSTAND3
T2SSE
HHH_2
AAA_16
PhoH
UvrD-helicase
Helicase_RecD
MobB
NPHP3_N
NTPase_1
SLFN-g3_helicase
AAA_28
DEAD
ATPase_2
TrwB_AAD_bind
NACHT
cobW
AAA
CbiA
MeaB
AAA_5
ATP_bind_1
HTH_23
UvrD_C
ABC_tran
AAA_18
SRP54
TsaE
RsgA_GTPase
AAA_14
Mg_chelatase
DO-GTPase2
bpMoxR
AAA_29
AAA_24
Pox_A32
Flavi_DEAD
KTI12
Motif
Other DBs
NCBI-ProteinID:
AFM23261
UniProt:
I4C120
LinkDB
All DBs
Position
complement(617760..619922)
Genome browser
AA seq
720 aa
AA seq
DB search
MAGNEKKHAERAIALEGVLDRLVFASDSSEFIVGRLTVRGRRDPVTIVGLLPKPRPGETL
LLQGQWEFDKKFGEQFRFETAEARVPSTIQGIEKYLSSDLIKGIGPEMAKRITAVFGEKT
LDIIEKKPEKLRNVPGIGPVRAEKISEAFVEQKSIRDVMLFLQTHGVSTTYAYKIFKRYG
NKSARVVSENPYVLATDIRGIGFRSADKIAGSIGIDMRSPLRANAGILHVLDTAQAEGHV
YYPLPTLLQKSRELLGIDNHTLEKCVENLAVSGTVVIEGDDRVYLAAMAARENAVARNMR
ELMIAARFLPGIKIDAAIQWVQQQQGLTLSEAQCEALHAVVEYKVLIVTGGPGTGKTTLL
KSLIEILERKKLRVLLCAPTGRAAKRLAEATGREARTVHRLLEYSPSEGGFQRGPSRPLE
AEAVVVDETSMVDISLMYYLLGAIHPQTTLILVGDADQLPSVGPGNVLGDLIESGKIHVV
RLQTVFRQASESMIVMNAHRINQGLLPAPTGDANALSDFYFIEKDDPDECVRLIKEMVSN
RIPGRFGFDPVNDLQILSPMHKGSLGTENLNRELREVLNPYGTKIRGDRFRVGDRVMQTR
NNYDKEVFNGDIGRIENYNTEEEEALIEFDGRSVIYHISELDEIALAYAVTIHKAQGSEY
PCVIIPMTTQHYVLLRRNLLYTALTRGKSLVVVIGSLKALQMAVENRIVEPRFTHLAAKI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaatgagaaaaaacatgcggaacgtgcgattgctcttgaaggggtgctggac
aggctcgtctttgcttctgactccagtgagttcattgtaggacgattaactgtacgcggt
cggagagatccggtcactattgtcggattgctcccgaaacctcggcccggtgagactctc
ctgcttcagggacaatgggagttcgacaagaaattcggcgaacagttcagattcgaaact
gcagaagcccgggtgccttccacgattcaaggcatagaaaaatatctctcatcagatctc
atcaagggaatcggccctgagatggcgaaacgcataaccgccgtatttggggaaaagacg
ctcgacattatcgaaaaaaaaccggaaaagctcagaaatgttcccggaatcggtcccgta
cgcgcggagaagatttcggaagcttttgtcgagcagaaaagcatcagggacgtgatgctc
tttctccagacccatggtgtttccaccacgtacgcgtacaagattttcaagcgatacggg
aacaagtctgctcgggtagtgagtgaaaatccgtacgtgctcgcaactgatatacgcggc
atcggattcagatctgcggacaagattgcgggcagcatcggaatagacatgcgttcccct
ctaagggcgaatgccggaattctgcacgtgttggataccgctcaagccgagggtcacgtc
tattatccgctgcccacgcttctgcaaaaatcccgggagcttctgggaatcgataatcat
actctcgaaaaatgcgtagagaatctcgcggtttcagggaccgttgttatcgaaggcgat
gatcgagtgtatctggccgcaatggctgcacgagaaaatgcggtagccaggaatatgcgc
gaactcatgattgcagcccggtttctgccgggaatcaaaatcgacgctgcaattcaatgg
gttcagcagcagcaggggttaacgctttcggaagcccagtgcgaagcattgcatgcggtg
gtcgaatacaaggtgttgatcgttacagggggtcctggaacaggaaagacaacactgctc
aaatcgctcattgaaattttggagcgcaagaagttgcgagtgctcctctgcgctcccacc
gggagggctgcaaagaggctcgcggaagctacaggtcgggaagcgcgtacagttcatcgt
cttctggaatattcgccttctgagggtggatttcagcgaggaccgtcacggcctcttgaa
gcagaggcagtcgttgtggacgagacgtccatggtagacatttccctcatgtactatctt
ctgggagccatacatccgcagacaacgctgatcctggtgggcgacgcagatcaactaccc
tcggtaggaccgggaaacgtacttggcgatctcatcgaatccgggaagattcacgtcgta
agactgcaaacggtgttcagacaagccagcgaaagcatgatcgtcatgaatgcgcatcgt
atcaatcagggattgcttccagctcctacaggagacgccaatgcgctttcggatttctat
ttcatcgagaaagacgatccggacgaatgtgtccgattaataaaagaaatggtgagcaac
cgaatccccggacgtttcgggttcgatccggtgaacgatctgcagattctcagcccgatg
cacaaaggaagcttgggaacggaaaaccttaatcgtgaattacgcgaagttctcaacccg
tacgggaccaaaatacgtggagatcggtttcgtgtcggcgaccgggtgatgcagactcgg
aataattacgataaagaagtcttcaacggagatataggccgaatcgaaaactacaatacg
gaagaggaagaagctctcatcgaattcgacggccgatccgtgatctatcacatttctgaa
ttggatgagatagcgctggcttatgcagttacgatccacaaagcccagggcagcgaatat
ccgtgtgtaataattcctatgaccactcaacactatgtgcttttgcgtagaaacttgttg
tacaccgctcttacgagaggaaaatcgcttgtggtggtgatagggagccttaaggcgctt
caaatggctgtagagaaccgtatcgtcgaaccgcggttcacgcatcttgcggcgaagatc
tag
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integrated database retrieval system
