Desulfomonile tiedjei: Desti_1906
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Entry
Desti_1906 CDS
T02147
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dti
Desulfomonile tiedjei
Pathway
dti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desti_1906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dti03000
]
Desti_1906
03400 DNA repair and recombination proteins [BR:
dti03400
]
Desti_1906
Enzymes [BR:
dti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Desti_1906
Transcription factors [BR:
dti03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Desti_1906
DNA repair and recombination proteins [BR:
dti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desti_1906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AFM24614
UniProt:
I4C4X3
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All DBs
Position
2287234..2288685
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AA seq
483 aa
AA seq
DB search
MNLDTQICDRARLARDPRFDGLFFIGVLSTGIYCRPICPARSPKAENIVYFPSAAAAAEA
GFRPCLRCRPEAAPGSPAWNGTSATVSRAVLLIRQGELQEQNMEDLASKLGVTGRHLRRL
FQIHIGASPKTLATTQKILFAKKLLSETDLSVTHIAFASGFGSIRRFNAAFSKMYGRTPS
SVRMRNNESKITGDELFRCTLTLSYRPPFDWQRMLEFFELRAIPGVEWVANGAYHRTIRI
NETTGMISVAPSPKGNALLLTVALSDSRDLMSIVERVRRMFDLDANMAAIHEVLTADAVL
EKSVRKHPGLRLPGIWDPFEAAVRAVLGQQVSVKGARTLIGRIVAKTAPRFESPDFRNLT
HFFPTAHELNTRDLGAIGMPESRVRSLQALAEEVDRENLFFVVKESLSDFIEKLTRIPGI
GDWTAQYIAMRAMGEPDAFPAGDLGIVKAMRQADKRLTVKEIRQRAETWRPWRAYATMYL
WHG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgatacacaaatctgcgacagggcgcgtctggccagggatcctcggtttgac
ggcttgtttttcattggggttttgagcaccggcatttattgccgtcccatatgccccgca
cggtcgcctaaagcggagaacatagtctactttccttccgctgctgcagcggctgaagcg
ggatttcgaccgtgtctgaggtgtcggccggaagcagcgcctggaagtccggcctggaac
ggtacatctgctacagtttcccgagcagtcttgctgatccgccagggcgagctccaagaa
caaaatatggaggatctggcctcgaaacttggcgtgaccggtcgtcacctgcgcagattg
tttcaaatccatatcggtgcttcgcctaagactctggctaccacgcagaaaattctattc
gcaaagaagctgctcagcgaaaccgatctgtccgtaacgcacatagcttttgcttcaggt
ttcggtagcatccggcgattcaatgcagcattcagtaagatgtacggcaggactccatca
tccgttcgcatgaggaataatgaaagcaagatcaccggagacgagctgttcagatgcacg
ttgactttgtcttaccgcccgccctttgattggcaacgtatgctggaattctttgaattg
cgagccataccgggcgtagagtgggttgcgaatggtgcgtatcatcgcactatcaggatc
aacgaaacgacaggaatgatttccgtggccccgtcgccaaaaggaaacgcgctattactg
acagtcgccttgtccgacagtcgagacctgatgtccattgtcgagagggtgcgacgcatg
tttgacctggacgccaacatggcggctattcatgaagtcttgactgcagacgccgtgctc
gagaaatcagtgagaaaacaccccggcctcaggttaccggggatctgggatccatttgaa
gcagccgtacgggcggtcctgggccaacaggtatcagtcaagggagcccgtaccctcatc
ggtcggatcgtcgcaaagacagcaccgagattcgaatcccccgatttccggaatctcaca
cactttttcccgacagcgcatgagctcaacactcgcgatctgggagcgatcggcatgcct
gaatcgcgagtccgttcgctccaggctctggcggaagaagtggatcgcgaaaacctcttt
ttcgtcgtgaaggagtcgctttcggatttcattgaaaaattgactcgaattcccggcatc
ggtgactggacggctcagtacatcgccatgcgcgcgatgggcgaacccgacgcgttcccg
gccggcgatctgggcattgtgaaggcaatgcggcaagcagataaacgtctcacggtgaaa
gaaattcgacaaagagccgaaacatggcgtccatggcgtgcttacgccaccatgtatctt
tggcacggctaa
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