Desulfomonile tiedjei: Desti_2617
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Entry
Desti_2617 CDS
T02147
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dti
Desulfomonile tiedjei
Pathway
dti03420
Nucleotide excision repair
dti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desti_2617
03430 Mismatch repair
Desti_2617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dti03400
]
Desti_2617
Enzymes [BR:
dti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desti_2617
DNA repair and recombination proteins [BR:
dti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desti_2617
MMR (mismatch excision repair)
Other MMR factors
Desti_2617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
DEAD
RecR_HhH
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFM25297
UniProt:
I4C6V6
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All DBs
Position
3106868..3108796
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AA seq
642 aa
AA seq
DB search
MKKTGYSNIAYEQDLNSAQLEAVTAPEGPLLIIAGAGSGKTRTIVYRVAWLVEQGIEPES
ILLLTFTRKAAEEMLSRASQLLGLRLTAIAGGTFHSTGNMLLRRYAALLGFDSSFSIMDQ
GDSVEAIDHVKKNLVPPLTDPKGFPKTRTIAEIISRAVGCACSVNEAIEKRCPHFGEFAP
EIDIIKVKYEEHKKNNNLMDYDDLLVNTIKLLEEHPRIRTEISEKWRYVLVDEYQDTNRL
QARIVQLLAFTHDNVMVVGDDSQSIYSFRGADFTNIVEFPNLFPGTRIIRLEENYRSTAP
ILSVTNSIIQRAAAGYSKRLFTQKTGGPLPISARSSTERQQSKFVVQCVRELNEHGVELN
EIAVLFRAGFHSFDLESELTRNNIAFVKYGGFKFLESQHIKDVLAHLKVIHNPADRLSWI
RILKLLPGVGDKTALQLAGTICQDGIPRSTAQIVSKPPKYGKDLDRLLELVFQLKNETNP
ISQKVELINAYYFPVLKEKYDNYPKRMRDLEYLADLTSSYKSLNRFLNDMALEPPDEERS
SERERQDSLVLSTIHSAKGLEWHTVILIWAAEGRIPSPMALVSPDDLEEERRLMYVATTR
AKHNLVIVAPHTALDRTRGQVPVKLSRFVEEIPQDYFRTYSV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccggttattcaaacatcgcatacgaacaggatttgaactccgcgcagctt
gaggctgtaacggctccagaaggacctctgctcatcattgccggggccggttcgggaaag
accaggaccatcgtgtaccgcgttgcctggcttgtggaacaagggatagaacccgaatcc
atcttgctgctgaccttcacgcgaaaggcagccgaagagatgctctcgcgagcatcgcag
ctcctgggtctcaggctgaccgccattgccggaggtacatttcattccacgggcaacatg
ttgctcagaaggtatgcggcccttctcggattcgattcatccttttccattatggatcag
ggcgattccgtggaagccatcgaccatgtgaagaagaaccttgttcctcctttgaccgat
ccaaaaggattcccgaagaccagaaccattgcggaaataataagcagagcagtcggatgt
gcatgcagtgtgaatgaagcaatagaaaagcgttgtcctcatttcggcgaatttgccccg
gagatcgacattatcaaagtcaagtatgaggaacataaaaagaataataatcttatggat
tatgatgatttactcgtgaacacgattaagcttttggaggaacatccgaggatcaggacg
gaaatatctgaaaaatggagatatgtgctcgtagacgaataccaagacacgaaccggctt
caggctcgcattgtgcaactactcgcctttactcacgataacgtcatggttgtgggagac
gattcgcaaagcatttactcgttccggggcgctgattttacgaatatcgtagaatttccg
aatctgtttcccggaacgcgcattatccgactggaggagaattaccgcagcaccgcgccc
atcttgagtgtgaccaacagcatcattcagcgggctgctgcaggttactcaaagcggctt
ttcactcagaaaaccggaggacctctccccataagcgcccgttcatctacggaacgccaa
cagagtaaatttgtcgtccagtgcgtgcgggaattaaacgagcatggcgtggaactgaac
gaaatagccgtgctttttcgagcagggttccattccttcgatttggaaagcgaactgacg
cgcaataatatcgctttcgtgaaatacggcggattcaagttcctggaaagtcagcacata
aaggatgtgcttgcgcatctcaaagtgatccacaatcctgcagaccgtttgagctggatt
cgtattctcaagcttctgccgggcgtcggcgacaagaccgcccttcaactggccggcact
atctgccaggacggcataccccgttccactgcccagatcgtatccaagcccccgaaatat
ggcaaagatctggaccggttgcttgaacttgttttccaactcaaaaatgagacaaatccc
atatcgcagaaagtggaactcataaatgcctattacttccccgtgctcaaggaaaagtac
gacaactatcccaaaagaatgcgcgatctggagtacctggcggatttgacttcgagttac
aagagcctgaatagatttctcaatgacatggctctcgagcctccggatgaggagagaagc
tccgaaagggagagacaggacagcctggtgctctccaccatacactcggcaaaaggtctg
gaatggcacacggtgatcctcatctgggcggcggaaggccgcatcccctccccgatggct
ctcgtatctcccgatgatctggaggaagaacgccgacttatgtatgtggcaaccacaagg
gccaaacacaatctcgttattgtggctccgcatactgcactggatcgaacccggggacag
gtcccggtgaagctctccagatttgtcgaggagattccgcaggattattttcgcacctat
tccgtttga
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