Desulfomonile tiedjei: Desti_3260
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Entry
Desti_3260 CDS
T02147
Name
(GenBank) transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dti
Desulfomonile tiedjei
Brite
KEGG Orthology (KO) [BR:
dti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dti03000
]
Desti_3260
Transcription factors [BR:
dti03000
]
Prokaryotic type
Helix-turn-helix
Other families
Desti_3260
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
AAA_5
HTH_8
AAA_2
GAF_3
AAA
AAA_16
AAA_22
AAA_7
Helicase_Sgs1
HTH_30
bpMoxR
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AFM25919
UniProt:
I4C8M8
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All DBs
Position
complement(3834120..3835721)
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AA seq
533 aa
AA seq
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MGKQRGNLERKYPTRRSMHWNLETRYRILLSINNAIITQTSRVKLFQALATEIHKHFRYD
RLSINLYDPETESLSYFAAADGIAPEGISSKESRPLAKGSVAQMVITSKSPVIIEDLNRY
EDLPSVISMLDSGLTATMAFPLMVRNRILGSVHFSFRKRPEDMHDLVEVLTDVSNQVAIA
VDNMLNYVALAKVNENLERQKRFLMVNGNDAYHRDHFFYASPAMAEIMSQIELVADTDAS
VLITGETGTGKDYLARTVHNLSSRRDHLFVKINCPALTESLIESELFGHGKGAFTGAHVQ
RVGRFEMGNGGTVFLDEVGDLPANLQAKLLQVIQDGEFERVGESRAIKVNIRIIAATNQD
LENSMRNGSFRRDLYYRLNMVTIHTPRLKDRPEDIALLVERLTKLQAKQMNRPAPEYSDL
ALEKLIHYHWPGNVRELKNLVIRLVILRPGMRISEADIDKILSTFQTEQQIPVSTLADAE
RTHIERALIKCKGVLGGPHGAARLLGMPRSTLQYRLRKFGLNPHDYQRGEGTS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaaacaaagagggaacctggagcgcaagtatcctacgaggcgatcgatgcattgg
aatctcgaaacacgatatcgcatattgctttccatcaacaatgccatcattacgcagact
tctcgagtgaaactcttccaggctctggctactgagatccacaagcattttcggtacgat
cggctgagcatcaatctgtacgatcctgagaccgagtccctcagctacttcgcagcagcg
gacggaatcgctcccgaggggatttccagtaaagaaagtcgtcctctggcgaagggttcc
gttgcccaaatggtgataacctcgaaaagtccggtgattatcgaggatctgaatcgctac
gaagacttgccttcagtgatctcaatgcttgattccggactcacggcgaccatggctttt
ccgcttatggtgcgcaatcgcattctcggaagcgtccatttttccttccggaaaagacct
gaggacatgcacgatctggtggaagtcttgaccgatgtgtcgaatcaggtggccatagcc
gttgataacatgctcaattatgtagccctggcaaaggtgaatgaaaatctggagcgccag
aagcgatttctcatggtcaacggcaatgatgcatatcatcgagatcactttttctatgca
tctcctgcaatggccgaaatcatgagccaaatcgaattggtcgcggacaccgatgcctct
gtgctgatcacgggtgaaaccggtacaggaaaagactatctggcccggactgtccataac
ttgagctcccgtcgcgatcatctcttcgttaagatcaactgtcctgctttgactgagtca
ttgattgaaagcgagcttttcggtcatggcaaaggggcatttacaggtgctcacgtccag
cgagtgggacggttcgagatgggtaacggcggtaccgttttccttgacgaagtgggcgat
ctacccgcgaatttacaggcgaagttgctgcaggtgattcaggatggcgagttcgagcgg
gtaggggagagccgtgccattaaggtgaacatacggatcattgccgcgaccaatcaggat
ctcgagaattctatgcggaacggatcgttcaggcgggacctctattatcgtttgaatatg
gtgaccattcatactccgcggttaaaagatcggcccgaggacatcgctctgcttgttgaa
cgcctcaccaaactccaggcaaagcaaatgaaccgacctgccccggagtactccgatctg
gctcttgaaaagcttattcattaccattggccgggaaacgttcgggagttgaagaatctc
gtcatacgcctggtcattcttcgtcccgggatgcgcatctcagaggctgatatcgacaaa
atactgagcacgttccaaaccgagcaacagatcccggtgagcacgttggcagatgcggaa
cgtacccacatcgagcgtgctctgatcaagtgcaagggtgttctgggcggcccgcacggt
gctgctcggctcctggggatgccccgttccaccctgcagtaccgtctacgcaaattcggt
ctcaatccacacgattaccagagaggtgaagggacaagctga
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