Desulfomonile tiedjei: Desti_4002
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Entry
Desti_4002 CDS
T02147
Name
(GenBank) DNA replication and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
dti
Desulfomonile tiedjei
Pathway
dti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desti_4002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dti03400
]
Desti_4002
DNA repair and recombination proteins [BR:
dti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Desti_4002
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Desti_4002
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
zf-C2H2_6
DUF7445
DUF2175
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AFM26643
UniProt:
I4CAQ2
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Position
complement(4666787..4667557)
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AA seq
256 aa
AA seq
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MVQSLILKKQDRGEADELVIFFSRELGWLRGIAKNSKKSRIRFGGHLEPFSLVDLTLRQR
KRDDLVWIDEAQVLHGHLGIRSDITKVAWASYFLELASMFLPEDSPDQNLFDFLHDILEQ
LEKDNVAPGFLSIMLDTIRLLGFVGFSPRFDSCTVCGKTFSTGQEAAFSSALGGICHREC
LPPGVPGVVTLSPGTLAVIRQGLKLEGEAAKRLRLHKKGLDELAAALAGFIRYLHGGEIP
SLYFLEELGLWPTRTD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcaatcattaattctcaagaaacaggaccgcggcgaagcagacgaactggtgatt
ttcttcagtcgcgagcttggctggctcagaggaatagcgaaaaattccaagaagagtcgc
attcgttttggaggacacctagagccgttttcgctggtcgatctcacgcttcggcagaga
aaacgagatgacctggtctggatcgatgaagcccaggttctccacggtcatctcggcata
cgttcggacatcaccaaagtcgcttgggcctcctatttccttgaattagcctcgatgttc
ctcccggaagactctccggaccagaatcttttcgattttctccacgacattcttgagcaa
ctggaaaaagacaatgttgcgccgggtttcttgagtatcatgctcgatacgatacgattg
ctcgggttcgtcggcttttcgccgcgtttcgattcctgcacggtttgcggcaagaccttc
agtaccggccaggaagcagcattttcttcagcgctcggagggatatgccatcgcgagtgc
ttgcctccgggagtgccgggagtagtaactttaagtcccggaacgctcgcggtcattcgt
cagggtttgaagctggaaggtgaagccgcaaagcggttgaggctccataaaaaggggctg
gatgaactagccgcagcgcttgccggcttcatcagatatctgcacggaggtgaaatacct
tctctctatttcctggaagaactgggactatggcctactcgtacagattag
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