Desulfomonile tiedjei: Desti_4642
Help
Entry
Desti_4642 CDS
T02147
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
dti
Desulfomonile tiedjei
Brite
KEGG Orthology (KO) [BR:
dti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dti03032
]
Desti_4642
03036 Chromosome and associated proteins [BR:
dti03036
]
Desti_4642
03400 DNA repair and recombination proteins [BR:
dti03400
]
Desti_4642
DNA replication proteins [BR:
dti03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Desti_4642
Chromosome and associated proteins [BR:
dti03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Desti_4642
DNA repair and recombination proteins [BR:
dti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Desti_4642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2442
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HTH_5
AARP2CN
Motif
Other DBs
NCBI-ProteinID:
AFM27266
UniProt:
I4CCH5
LinkDB
All DBs
Position
complement(5368212..5368742)
Genome browser
AA seq
176 aa
AA seq
DB search
MREIIEVVPIDDYRLEIGFGDGERTIVDMKPLMKRKSFQPLMDKALFSQVEIDRKFGGVQ
WPNGIDVCTDWIEAQSKSYETRNLTRAELISQISNKTKVSKKAVDQVLKSLVGTIRRTLE
ENREIRIPELGTFSVVQRTGRTIVDFRTGIKIKILPTKAPRFRASKSLKDSIKKSK
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgagagagataattgaggtcgtacccatagacgattaccgactggagatcggattcggt
gacggcgaaagaaccatcgtagatatgaagcctcttatgaagcggaagagttttcagccg
ctcatggataaagctttatttagtcaggttgagatcgatcgaaagttcggaggagttcag
tggcctaatggcattgatgtttgcaccgattggatcgaagcgcaatcaaaatcctacgag
acgcggaatctcacaagggcggaactaatatcgcagatttcgaataaaacgaaggtttcc
aagaaagcagtcgatcaggttttgaaatctttggttggaaccatacgccgcacccttgaa
gaaaacagagagataaggattcccgagttgggaactttctcggttgttcaaaggaccgga
cgaacgattgttgatttcaggactggaattaagataaagatattacctacgaaagcacct
cggttcagagcatccaagtctcttaaagactcaattaagaagtcgaagtga
DBGET
integrated database retrieval system
