Desulfomonile tiedjei: Desti_4937
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Entry
Desti_4937 CDS
T02147
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dti
Desulfomonile tiedjei
Pathway
dti04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Desti_4937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dti03019
]
Desti_4937
03009 Ribosome biogenesis [BR:
dti03009
]
Desti_4937
04131 Membrane trafficking [BR:
dti04131
]
Desti_4937
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dti04147
]
Desti_4937
Messenger RNA biogenesis [BR:
dti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Desti_4937
Ribosome biogenesis [BR:
dti03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Desti_4937
Membrane trafficking [BR:
dti04131
]
SNARE
SNARE associated proteins
Others
Desti_4937
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Desti_4937
Exosome [BR:
dti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Desti_4937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_14
AAA_2
AAA_33
TIP49
AAA_22
NPHP3_N
CDC48_2
nSTAND3
RNA_helicase
AAA_28
AAA_18
Sigma54_activat
NB-ARC
Mg_chelatase
IstB_IS21
ABC_tran
NACHT
AAA_17
Rad17
Viral_helicase1
Zeta_toxin
TsaE
AAA_7
AAA_3
Parvo_NS1
AAA_lid_PRS2_C
AAA_11
ATP-synt_ab
SLFN-g3_helicase
Vps4_C
bpMoxR
ORC-CDC6-like
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AFM27551
UniProt:
I4CDB0
LinkDB
All DBs
Position
5707160..5709283
Genome browser
AA seq
707 aa
AA seq
DB search
MGKTPESIKLKVTEALSKDMGRAYARMGPEDLEKLNASIGDIVEIKGKRTTVCKAMPAYK
ELRGQSKIQLDGLSRQNAKAGLDENVVVTKISCRPAERVVLTPTNVTPSERDLKYIGGLL
DGLPAVEGDTIRASLFGSRSADFKVESTVPKEAVVIVPTTQLVVGNADESGKARILSYED
IGGLKSQLHRIREMIELPLRYPEVFERLGIDAPKGVLLHGPPGCGKTLIARSIANETEAN
FFTVSGPEIVHKFYGESEAHLRKIFAEATAKGPSIVFLDEIDAIAPKREKVVGDVEKRVV
AQLLALMDGLTKRQNVIVIAATNIPNALDPALRRPGRFDREIAIPIPDRNGRLEILEIHS
RGMPLSTDVNMEHLAEITHGFVGADLEALCREAAMICLRRIMPDIDFAMAGIPYEQLKKL
EVHMHDFLTALKDVEPSAVREVFVEVPDVRWEDVGGHAGLKTRLIESVEWPLQYPHIFER
AGTKPPRGILLGGPPGCGKTLLAKAIANESKVNFISVKGPALLSKYVGESEQAVREVFRK
AKQASPCIVFFDEIDALVPVRSSGSSDSHVGERVLSQFLAEFDGIEELNGVLVLGATNRL
DMLDPAVLRPGRFDEIVEIPIPEEADREEIFRVHLRSKPVEKGVDPAKLAKETEGFSGAE
IAAVCNKAALAAVRRCVNALKGSPDEEVHVLVLISDIETALSEMRED
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagacacctgagtcaattaagcttaaagtaaccgaagcactcagtaaggacatg
gggagagcctacgctcgaatgggcccggaagaccttgagaaattgaatgcttccataggc
gacatcgtagagatcaaagggaagcggacaacagtctgcaaagctatgcctgcctataag
gaattgaggggacaatccaaaatacaactggatggtctttcgcgacagaacgcaaaagca
ggactggatgaaaacgttgtagtgaccaaaatttcgtgccggcccgctgagcgtgtggtg
ctcactcctacgaatgtcaccccctccgaacgcgatctgaaatacattggcggtctgctc
gacgggttaccggctgtagaaggtgacaccatcagagcatcgctctttggcagccgatcg
gctgatttcaaggttgaaagcactgtcccgaaagaagccgtcgtcatcgttcccaccacg
caacttgtggtcggtaatgcggacgaaagcggcaaggctcggatcctttcgtacgaagat
ataggcggtctcaagagccaattgcaccggatacgggaaatgatcgaacttcctttgcga
tatccggaagtcttcgagcgccttgggatcgatgctccaaaaggggttctccttcatggg
cctccgggatgcgggaaaacacttattgcgcgatccatagcgaatgagactgaggcgaat
ttcttcaccgtgagcggaccggaaatcgtccacaagttttatggagagagtgaagctcat
ttacgaaagattttcgcggaagcgactgcaaaaggcccgagcatagttttcctcgacgag
atagacgctattgcgccgaaacgggagaaggtggtcggggatgtggaaaaaagggttgta
gcgcaactcctggccttgatggatggtttgaccaagcgccaaaacgtaatcgttattgca
gctacaaacattcccaatgctcttgaccctgctttgagacgacccgggagattcgacaga
gagatcgcgattcccattccggatcgtaacggacggctggagatacttgaaatccacagc
agaggcatgcccctctcgaccgacgtgaacatggagcatctggctgaaatcacgcatggg
tttgtgggagccgacctggaagcactgtgtcgtgaagctgccatgatatgtctgcgcagg
atcatgcctgatatagactttgccatggccgggattccgtacgagcagctcaagaagctt
gaagtgcacatgcatgattttctcacggctctgaaggatgtggaaccgtcggcagtcaga
gaggtctttgtggaagtgcctgatgttcgctgggaagatgtgggaggtcatgccggcctg
aagacgcggctcattgagtcagtggagtggccgttacagtatccgcatatctttgagcga
gcgggcactaagccaccgagaggaatcctactgggaggccctccgggttgcggcaagact
ctcctggcaaaagcaatagccaacgagagtaaggtcaactttatatcggtaaaaggtccg
gctttgctttccaagtatgtaggagaatcggaacaagcagtaagagaggtgtttcggaag
gcaaaacaagcatctccgtgtatcgtctttttcgatgagatcgatgccctggttcctgtc
cgaagtagcggatcgagcgactcccatgtgggagaaagggttctcagccaattcctggcg
gaattcgatggcattgaagagttgaacggtgtcctcgtccttggagcgaccaacaggttg
gacatgcttgatcccgcagtgttaaggccggggagattcgatgaaatagtcgagattcct
atccctgaagaagcagaccgagaagaaattttccgagtgcatctgcgaagcaagcctgtg
gaaaagggagtggatcctgcgaaattggccaaagaaacggaaggtttttctggagccgaa
atcgctgcggtctgtaacaaggccgctctggctgcggtcaggcgttgtgtcaacgctctc
aaaggcagcccggacgaagaggtgcatgttctggtgctaatatccgatatcgaaacggct
ctttccgaaatgcgtgaggattga
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