Desulfomonile tiedjei: Desti_5288
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Entry
Desti_5288 CDS
T02147
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dti
Desulfomonile tiedjei
Pathway
dti03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dti00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Desti_5288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dti03021
]
Desti_5288
03400 DNA repair and recombination proteins [BR:
dti03400
]
Desti_5288
Enzymes [BR:
dti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Desti_5288
Transcription machinery [BR:
dti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Desti_5288
DNA repair and recombination proteins [BR:
dti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Desti_5288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Spectrin_7
Motif
Other DBs
NCBI-ProteinID:
AFM27878
UniProt:
I4CE87
LinkDB
All DBs
Position
6086559..6087608
Genome browser
AA seq
349 aa
AA seq
DB search
MNGTGHTLMRRNWTELIRPRRMEVEDSTHTPFYGKFVCEPLERGFGITLGNSLRRVLLSS
LQGAAITSVKIDGVLHEFSTIPGVKEDVTDVILNLKRIQLKMHTSQPKVLKLEATGEGIV
RAGDIITDETVEIINPDQEIASLSKEGKLSMTIVAEWGKGYVPAELNKKEEDPIGTLALD
SVFSPIRKVSYKITNARVGRRTDYDKLTMEIWTSGAVYPEDALAQAAKILREQFLVFLNF
AEEERPIHEEKPQREPEINENLYRSVNELELSVRSANCLKNADIKFIGELVQRTEAEMLK
TKNFGRKSLNEIKEILADMDLHLGMAIPSFPSRDELERMRQERESYIGE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaacagggcacaccctgatgagacgaaactggacggaactcatccggccgcgc
cgcatggaagtggaagactccacgcacaccccgttctacggcaagttcgtctgtgagccg
ctggaacgagggttcggcataaccctggggaattcgctcaggagagttctcctttcatct
ctccagggcgcagccataacctcagtgaagattgacggagttctccatgagttctccacg
atcccgggcgtaaaagaggatgttactgacgtaatcctcaatcttaagagaattcagctt
aaaatgcatacgtcccagccaaaagtgctgaaacttgaggcaactggcgaaggtatagta
agggcaggggacatcatcacggatgaaaccgtggagataattaatcctgatcaggaaatt
gcatctctgtccaaagaaggcaaactctctatgactattgttgcggaatggggaaaaggc
tatgtgcccgcggaactgaacaagaaggaagaggatccgattggcacattggcgctggac
tcagtattttctcctattcgtaaggttagttacaaaattaccaatgcccgggtcggccga
agaacagattacgataagctcaccatggaaatctggacaagcggcgctgtgtacccggaa
gacgccttggcgcaggcagcgaaaatcctcagagagcagttcctcgtatttctcaacttt
gccgaagaggaaagaccgattcacgaagagaaaccgcagcgtgagccggagataaacgaa
aatctgtaccggagcgtaaacgaactggaactcagcgtgcgttcggcaaattgtctgaaa
aatgcagacatcaaattcataggcgaactggtgcaacgcacggaagcagaaatgctcaaa
acaaagaatttcggacggaaatctctcaacgaaatcaaggaaatccttgctgatatggat
ctccatctgggaatggctattcccagttttcccagccgcgatgaattggagcgaatgcgg
caggagcgggaaagctatatcggcgagtaa
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