Desulfomonile tiedjei: Desti_5511
Help
Entry
Desti_5511 CDS
T02147
Name
(GenBank) putative xylanase/chitin deacetylase
Organism
dti
Desulfomonile tiedjei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Polysacc_deac_1
Big_9
DUF2334
Ig_SibA
Motif
Other DBs
NCBI-ProteinID:
AFM28093
UniProt:
I4CEV2
LinkDB
All DBs
Position
6353127..6359096
Genome browser
AA seq
1989 aa
AA seq
DB search
MVFANMRKLCRELVLEPLEDRVVLDAYVDPVYQSDITVVDALAAVNHEPIAYAQSITLVE
NQVSQITLTGDDGDPDVVQSLTFFLDSVPANGALYLSQADAQNGTNPLGVGASLTTGVLW
YKSALNNDMDTSFMFHVKDDGGTANGGDDTSASALVTVTVAPDNQSPDAGNFSVVVNEDT
AIKVTGWNFTDAEGNQGQSIRITDLPDHGILFIDANDNNVVDPGEAIGSDQLNGRVTFTF
DDGYLNNYINAFPIMEEYGVEGVSLVVTGDIGQNAEAMTWSQLQEMQAAGWEIGSHSMTH
PMLTELTDSQLVYELSESKNLLVQHGLTGTSFAYPYGDFDPRVVEYVMDYYEGCREAWGN
NGINETPGNPYAIYNRSVDNTTTPQEVIQWINDAVANNYWLVISFHHIVTGTPGPYQYNV
NNFETIVSYVASHNIATPTISEVLNNDLAPISWADATTKLKYIGSQDYYGQDSFQYVVID
SAGSEGTMPVDAGTTTVTVNPVNDDPINDEPIANPQSITLTENQVTQITLTGDDGDPDVT
QTLTFFLDSLPANGALYLSQADAQSGTNPLGVGASLSTGVLWYKSGLNADADTSFMFHVK
DNGGTANGGDDTSASALVTVTVTPDNQSPDAGNFSTVVNEDTAVNVTGWNFTDAEGNQAQ
SIRITDLPDHGTLFIDANDNNVVDPGEAISLQPNEGRVTFTFDDGYLDTYTNAFRIMDTY
DVEGVSLVVTGDIGDAWAMTWSQLQQMQAAGWEIGSHSMTHPMLTGLTDSQLVYELSESK
NLLDQYGLTGTSFAYPYGDFDPRVAEFVSRYYEDCREAWGNNGINEIPGNPYAIYNRSVD
NTTTPQEVIQWINDAVANNYWLVISFHRIVDGTANPYEYNVNNFETIVSYVASHNIATPT
ISEVVNNDLAPISWADATTKLKYIGDQEYSGSDSFQYVVIDSAGSEGKMPADAGTAIVTV
IAVNDAPVNSIPGPQTVNGGTDLLFSTANGNAISISDADAGTEAVRVQLTATHGTLTLSG
TSGLSFTAGDGTTDATMTFTGSMTSINAALNGMHFTPTSNYSGDATVQIVTNDLGNNPSG
EMSDSDTVNITVVSTSGPPVAGDFAVSVNEDAVTTVSQWTFTDPNGDSAQSIRITDLPDH
GTLFLDANTNNILDANEAVSLNQVISWADAKTSPKVKYVGSQNYNGQDSLAYVVIDSSGE
EGVAPDGDGTGSITVTAVNDAPVNAVPVAQTMNANTSLIFSTANGNVISISDVDAGTDSV
RVQLTATNGNLTLSGIGGLSFSAGDGTADATMTFTGSVASINAALNGMSFTPTSNYSGAA
TVQIVTNDLGHNPSGEMSDSDTVNITVVSTSGPPVAGDFAVSVNEDIVATVSQWTFTDPN
GDSAQSIRITDLPDHGTLFLDANTNNILDANEAVSLNQVISWADAKTSPKVKYVGSQNYN
GQDSLTYVVIDSSGEEGVAPAGDGTGSITVAAVNDAPVNAIPAAQTMNANTSLIFSTANG
NVISISDVDAGTDSISVQLTATNGNLTLAGTSGLSFTAGDGTADATMTFTGSVASINAAL
NGMHFTPTSNYSGAASVQIVTNDLGHNPSGEMSDSDTVNITVVSAGGPPVADDFTLSVKE
DTVVTVSKWTFTDPDGNSAQSIRITDLPDHGTLFLDANANNILDTSEAISLNQVISWTDA
KTTPKVKYVGSQNYNGQDSLAYVVIDSSGQEGIPSAGDGTGTITVTAVNDAPVNAVPGSQ
SINEDTVLTFSAANGNAISISDVDAGTEPVRVTLTATRGKLTLSGTTGLTFSTGDGTADT
TMTFTGSIDDINAALNGMNFTPNANYAGAATVKIVTNDLGNNPSGAKSDTDTIAVTVNAI
DDAPVNSVPGTQTVSAGQTLVFNNVNGNRIRVSDVDAGANQIEVTLTAANGTLTLYSLTG
LTFSAGDGTNDESMTFRGTVSSINAAINRLRFIPTIAGSASLSITTNDLGASGSGGPLTD
TDSIQINVT
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggtattcgccaacatgagaaaactgtgtcgagaattagtgctggagccattagaagac
agagttgtcctcgacgcttacgtggatcccgtctatcagtcagacattactgtcgttgat
gcgttggcggcggtcaatcacgaaccgattgcatatgctcagagtatcacactggtggaa
aaccaggtgagtcaaatcaccttgacgggagatgacggtgatcctgatgtggttcagagc
ttgacattcttcctcgattccgtcccagccaatggagcgctttacctgagtcaggccgat
gcccagaatgggacgaatccgctcggagtaggcgcttctcttaccacgggtgttctttgg
tacaaatctgctctgaataacgatatggatacgtcgttcatgtttcatgtcaaagatgat
ggcggaacagctaatggcggcgatgacacaagcgcttctgcccttgttacagtaaccgtg
gcaccggacaatcagtcacctgacgccgggaatttcagtgtggttgtgaatgaagatact
gcgatcaaggtgacagggtggaatttcactgatgcagagggcaatcagggccaatccatc
agaataacagacctgcccgaccacggcattctgtttattgatgcaaatgataacaatgtc
gtagatcctggtgaggcgatcggttccgatcagctcaatggaagagtgacgttcactttt
gacgatgggtatctgaataattatatcaacgcctttcctatcatggaagaatatggtgtt
gaaggggtctcgctagtcgtgacaggtgacatcggacagaacgccgaagccatgacctgg
agtcaactgcaggagatgcaggctgccggatgggaaattggcagccacagcatgacccat
ccgatgctaacggaactcacggactcgcagttggtttacgagttgtccgaatcgaagaat
ttactggttcagcacggattgaccggaacaagttttgcctacccctatggtgatttcgac
ccaagagttgtcgaatacgtaatggactactatgaagggtgtagagaggcctggggaaat
aacgggatcaatgaaacacccgggaacccctatgcaatttacaacagatccgttgacaat
acgacgactccccaggaagtgattcaatggataaatgatgctgtagcgaacaattattgg
ctggtaatttcgtttcaccacatagttactggcacaccaggcccttatcaatataatgtc
aacaacttcgagaccattgtaagttacgttgccagtcacaacatagctactccaacgata
agtgaagtcttgaataacgacttggcaccaatcagttgggctgatgcaacgaccaaattg
aaatatatcgggagtcaggattattacggacaggattcctttcaatatgtggtgatcgat
tccgccgggtcggaaggcacaatgcctgtcgatgccggaacaactacggtcacggttaat
ccggtgaacgacgatccaataaacgacgagccgatcgccaatcctcaaagtattacattg
accgaaaaccaggtgactcagatcactcttaccggagacgacggtgatcccgacgtaacc
cagactttgacgttcttccttgattccctgccggccaatggagcgctttatctgagtcaa
gccgatgctcagagtgggaccaatccgcttggagtaggggcctctctttccacaggcgtt
ctttggtacaaatcagggttgaatgcggacgcggatacgtcgttcatgtttcatgtcaaa
gataatggcggaaccgctaatggtggcgatgatacgagcgcttccgcacttgtgacagtt
accgtaacaccggacaatcagtcgcctgatgcggggaatttcagcacagttgtgaacgaa
gacacagcagtgaacgttacgggttggaacttcaccgatgctgaaggcaatcaggcccag
tccatcagaataacggaccttccggaccacggtactttattcattgatgcaaatgataat
aatgtggtcgatcccggagaagcaatcagtcttcagcccaatgaaggaagagtaaccttt
acctttgacgacggatacctggacacgtatacaaacgccttccgcattatggatacatac
gacgttgaaggcgtatcgttagtcgtaacaggtgatatcggagacgcgtgggcaatgacc
tggagccagctccagcaaatgcaagctgccggttgggagatcggcagccacagcatgact
catccgatgcttaccggactgacggattcccagttggtatacgagctttctgaatcaaag
aacttgttggatcagtatggtctgaccggaacgagtttcgcgtacccctatggtgatttc
gatccgagagtcgccgaattcgtaagtcgctattacgaggattgtcgagaggcctggggg
aataacggcattaatgaaattcccggtaatccgtatgcgatttacaatagatccgtagac
aacacgacaactccccaggaagtgattcagtggataaatgacgctgtggcaaacaattac
tggttggtaatctcattccacaggattgtggacggaacagcgaacccttatgaatataat
gtcaacaattttgagaccattgtgagttacgttgccagtcacaatattgctactccaacg
ataagtgaagtagtgaataacgacttggctccaatcagttgggccgatgcaacgactaag
ctcaaatatatcggtgatcaggaatatagcggctctgattctttccaatatgtagtgatc
gattcggcaggctccgagggaaaaatgcctgctgatgcgggaacagccatagtcactgta
attgccgtgaacgatgcacccgtaaactctataccaggccctcagaccgtgaatggaggt
accgatctgttattcagtactgcaaacgggaatgcaatttccatttctgatgccgatgcg
ggtaccgaagcagtcagagtgcagttgaccgctacacacggcaccttgacgcttagcgga
accagcggtttgagcttcaccgcaggtgacggaaccactgacgcaaccatgacctttacc
ggaagcatgaccagtatcaatgctgctctcaacggcatgcacttcacgcctacttccaac
tacagcggtgatgcaacggtgcaaatcgtcacgaacgatctgggaaataatccatcaggt
gaaatgtccgacagtgacacagtaaacattaccgtcgtgagtaccagcggtcctccggtg
gccggtgattttgcggtgtccgtaaatgaggatgcagtcactaccgtatcgcaatggact
ttcaccgatccgaatggcgactctgcacaatcaataagaataacggatcttccggatcac
ggcacgctgttcctggacgccaacaccaacaatatccttgatgcaaacgaagcagtgtct
ctcaatcaggtgataagctgggcggatgccaagacctcccccaaagtgaagtatgtgggg
agccagaactacaacggtcaagattctttggcgtacgttgtgattgattccagcggagag
gaaggggttgctccggatggtgacggaacgggcagcattacggtgaccgcggtgaacgat
gcccctgtgaatgctgtgcctgtagcgcagacgatgaatgcgaatacgtctctgatcttc
agtacggcaaacgggaatgtaatctccatttccgacgtggatgctggaaccgattcggtc
agggttcaactgacggccacaaacgggaatttgacgcttagcggaatcggtggtctgagc
ttcagcgcaggtgacggaaccgctgacgcaaccatgacctttaccggaagcgtggccagc
attaatgcagctctcaatggtatgagctttacgcccacttccaattacagcggcgcagca
accgtgcagatcgtaacaaacgacctgggacacaatccatcaggtgaaatgtccgacagt
gacacagtaaacattaccgtcgtgagtaccagcggtcctccggtggccggtgattttgcg
gtgtccgtaaatgaggatatagtcgctaccgtatcgcaatggactttcaccgacccgaat
ggcgactctgcacagtccatacgaataacggatcttccggatcatggcacgctgttcctg
gacgccaatactaacaatatcctcgatgccaacgaagcagtgtctctcaatcaggtgata
agttgggcggatgccaaaacttcccccaaagtgaagtatgtggggagccagaactacaac
ggtcaagattctctaacgtacgttgtgattgattccagcggagaggaaggggttgctcct
gcaggtgacggaacgggcagcattacggtggccgctgtgaacgatgcaccggtgaacgca
atacccgccgcacagacgatgaatgcgaatacgtctctgatcttcagtacggcaaacggg
aatgtaatctccatttccgacgtggatgctggaaccgattcgatcagcgttcaactgact
gctacaaacgggaatttgacccttgccggaaccagcggtctgagcttcaccgcaggtgac
ggaactgctgacgcaaccatgacttttaccggcagcgtagccagcattaatgcagctctc
aatggcatgcacttcacgccgacttccaattacagcggcgcagcatccgtgcagatcgtg
acgaacgacctgggacacaatccatcgggtgaaatgtccgacagtgacacggtaaacatc
acggtagtttctgccggtggaccaccggttgcggatgatttcacgctcagcgtgaaggag
gatacggttgtcacagtatcgaaatggacttttaccgatcctgatggcaactcggctcaa
tccatacgaataacggatcttccggatcatggtacgctgttcctggatgccaacgcaaac
aatatcctggatactagcgaagcgatatctctcaatcaggtgataagctggacggatgcc
aagactactcctaaagtgaaatatgtgggaagccagaattacaacggtcaagattctctg
gcgtatgttgtgattgattccagtggacaggaagggattccttcggctggtgatggaacg
gggacaatcacggtgactgccgtgaatgatgctccggtaaacgcagttcctggctctcag
agcatcaatgaagacactgttcttacattcagcgcagcaaacggcaacgctatctcaata
tccgacgtggatgcaggaaccgaacccgtcagagtgacgttgaccgcgacacgagggaaa
ctgacgcttagcggaaccactggcctgacgttcagtacaggtgacggtaccgcagatacg
actatgacctttaccggaagcatagatgacatcaatgcagctctcaacggcatgaacttc
acgccaaacgcaaattacgccggtgctgcaaccgtgaagatcgtcacgaacgatctgggg
aataatccatcgggcgcgaagtctgacacggatacgatcgctgtcaccgtaaacgctatc
gatgacgctccggtcaactcagtaccaggcacacagacggtttcggccggacaaactctt
gtgttcaacaacgtcaatggaaacaggataagggtttccgatgtagacgcgggagctaat
cagatcgaggtaacgctcacggcggccaacggaaccttgaccctttacagcttgacgggt
ttgaccttcagtgcgggagacgggacaaacgatgagagcatgacattccgtgggacagtc
agcagcattaacgctgcgatcaacagactccggttcattccgactattgccggctctgcg
agcctcagcattactacaaacgatctcggagcatcgggctcgggaggtccgttgacggac
accgacagtatccagattaacgttacctga
DBGET
integrated database retrieval system
