Deefgea tanakiae: K4H28_00320
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Entry
K4H28_00320 CDS
T08586
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dtk
Deefgea tanakiae
Pathway
dtk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K4H28_00320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dtk02022
]
K4H28_00320
02035 Bacterial motility proteins [BR:
dtk02035
]
K4H28_00320
Two-component system [BR:
dtk02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
K4H28_00320
Bacterial motility proteins [BR:
dtk02035
]
Pilus system
Twitching motility proteins
K4H28_00320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_19
HTH_23
AAA_16
HTH_28
HTH_30
AAA_22
Xre-like-HTH
HTH_50
PG_1098_Fer
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
QZA77923
UniProt:
A0ABX8Z5R2
LinkDB
All DBs
Position
71154..72518
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AA seq
454 aa
AA seq
DB search
MAKKSKALPRVLVVDDEVDLAELLELTLLKMGLDVEKAHGVIAAKALIDSQHFDLCLSDM
RMPDGEGLDLVRHIQAKGLDLPIAVITAYGSTENAVAALKAGAFDYLAKPVALEQLRALV
KSALKIDATPAVKAARRDRPLLGDSVALQQVLVLIEKLARNQAPVYVTGESGSGKERAAR
AIHASSNRAEKPFVAVNCGAIPENLMESEFFGYRKGAFTGAMDDREGFFQAANGGTLFLD
EVADLPLAMQVKLLRAIQERKVRQVGGVNEVDVDVRIISATHQNLARCVESGKFRQDLYY
RLNVIELKMPALREMGDDVLTIAQFLVEDIAARQGMPVMKFTAAAKKALCRYDFPGNVRE
LENILERAVALADGTEIDSDDLQLQQSQCDKAEAVAANLGDTYPLQDYLDRVEKAAIVAA
LDKTGFNRTQAAKLLGVTFRSLRYRLERLGIVEG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaatctaaagcattaccgcgtgtcttggtcgttgacgacgaagtggatttg
gccgagttgctggagctgactctgctcaaaatgggtttggacgtggaaaaagcccatggc
gtgatcgcggccaaagcactgatcgacagccagcattttgacttgtgcttatctgatatg
cgcatgcccgatggggagggcctcgatttggtgcgccatattcaggctaaaggcttggat
ttaccgattgcggtgattaccgcttacggcagtactgaaaatgcggtggcggcactcaaa
gcgggtgcgtttgattatttggctaagcccgttgccttggagcaattgcgtgcgttggtc
aaatcggcgcttaaaatcgacgccacgccagcggtgaaagcggcgcggcgtgatcgacct
ttgctgggtgattcggttgcgctgcaacaggttttggtcttgatagagaaattggcgcgc
aatcaagcgccggtctatgtgacgggcgaatctggctcagggaaagagcgggcagcgcgc
gcgattcatgcaagctcaaatcgggccgaaaagccttttgttgcggttaattgcggtgca
attcctgaaaatctgatggaaagcgagttttttggttatcgcaaaggcgcttttaccggc
gcgatggacgatagagaaggcttttttcaggccgccaacggcggaactttgtttttagat
gaagttgccgatttgccattggctatgcaggtcaagttacttcgtgcgattcaagagcgc
aaggtgcgccaagtaggtggtgtgaatgaggttgatgtggacgtacggattatctcggcc
acccatcaaaatttggcgcgttgcgtagaaagtggcaagtttcgccaagatttgtactac
cgcttgaatgtcatcgagctaaaaatgcccgccttgcgtgaaatgggcgacgatgtactg
acgatagcgcaatttctggttgaagacatcgctgcgcggcaaggtatgccggtgatgaaa
tttaccgctgcggcgaagaaagcactctgccgctatgactttcctggcaatgttcgagag
ttggaaaacatacttgagcgggcggtggccttggccgacgggactgaaattgatagtgat
gatttgcaactgcagcaaagccagtgcgacaaggctgaggcggttgcggccaatttgggc
gatacttatccgctgcaagattatttggatcgcgtcgaaaaagcggccattgtcgctgcg
ctagataaaacaggttttaatcgcacgcaagcggcaaaactgttaggcgttactttccgt
agcttgcgctatcgtcttgagcgcttagggattgttgagggttga
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