Deefgea tanakiae: K4H28_01085
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Entry
K4H28_01085 CDS
T08586
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
dtk
Deefgea tanakiae
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dtk03000
]
K4H28_01085
Transcription factors [BR:
dtk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K4H28_01085
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_28
HTH_8
HTH_20
CopK
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QZA78068
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Position
complement(222883..223794)
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AA seq
303 aa
AA seq
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MHHQLFLTANMNDATLNYRHLYYFWVVTQEGSISAAARKLEMTPQTISSQLAKLEEQTGK
ALFKQVGRQLELTDAGRSILPFADQIFMLGEQMQQILASDATPRQRFNVGVADALPKIVA
QQLLASTHSPQTRLMCIEGSPDELMAKLALHQLDVVLADRPAAHGAHLRLASQALVECPV
MILGNAAQTAQYAPDFPASLHGAPMLLPTRNTALRIQLDLWFSDQNIVPDIVGEFADSAL
MKAFAIAGIGLYPSPMIAGNPIPSSELRSLGHLAGLYANYYALYAPKKINHPMLDLLLSS
TQV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcagctttttttgacagccaatatgaacgacgcgaccctcaactatcgacac
ttatattatttctgggtggtgacccaagaaggcagcatcagcgcagcggcgcgcaaatta
gaaatgacgccgcaaaccatcagcagccaattagcaaaattagaagaacaaacaggcaaa
gccttgtttaagcaagtcggtcgccaacttgaactcaccgatgcggggcgttcgattttg
ccgtttgccgatcagatttttatgctgggcgaacagatgcaacaaatcctcgccagcgat
gcaacgccaagacagcgctttaatgtgggtgtggctgatgcgctgccaaaaatcgtcgcc
caacaattattagccagcacacatagtccgcaaactcgcttaatgtgtattgagggttcg
cccgacgagctgatggcaaagctagcattacaccaactagacgtggttttggctgaccgc
cccgccgcgcacggcgcgcacctgcgtttggcaagccaagcgctagtggaatgccccgtg
atgatcttaggcaacgcagcgcaaacagcacaatacgccccagatttccccgctagcctg
catggtgcgcccatgctgttaccaacgcgcaataccgccctgcggattcaattagaccta
tggttttctgatcaaaatatcgtgcctgacattgtgggtgaatttgcggacagcgcttta
atgaaagcattcgctattgcgggtattggtctatatccatcacccatgattgccggcaac
ccaatacccagtagtgaactgagatcactgggtcatctagcaggcttgtatgccaattac
tacgcactgtatgccccgaaaaaaatcaatcatccgatgctggatttactactgagttcg
acacaagtttaa
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