Deefgea tanakiae: K4H28_02260
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Entry
K4H28_02260 CDS
T08586
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
dtk
Deefgea tanakiae
Pathway
dtk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K4H28_02260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dtk02000
]
K4H28_02260
Transporters [BR:
dtk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K4H28_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
CALCOCO1
DUF2742
Motif
Other DBs
NCBI-ProteinID:
QZA78268
LinkDB
All DBs
Position
complement(480662..483736)
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AA seq
1024 aa
AA seq
DB search
MSHGISWWAIHRPVATLLLWIAVMVAGTIAWFHLPIAALPTYDTPTISVSASLTGASPET
MANAVATPLEKQFSTIPGLAMMTSTSKLGSTNITLEFAPSRDIESAAVDVQAALYRANRS
LPSDMKSPPSYRKVNPSDAPILMLSINSPSLSLSELNDYSDNLIGPALSTIDGVAQVTIY
GQKRFAVRVSVDPDLLAARDLSLPELAAALKTANANSPVGQLEGERQTLMLQANEQLKNA
AEFSSLVVANRNGLPVRLGDVATVEDSVENIKSGSWIDGQRSIILAILRQPGANTVATVD
AINAMLPRLIAQMPESVEVKKLNDRSTSIRESIHDVTLTLILTMGLVVLSVMLFLRRAAA
TLIPSVSLPISMLATFALMYWLGYSLDNISLMGLTVALGLVVDDAIVVLENIVRHIEEGM
QPWDAAIKGAGEVAFTVVSISISLIAVFIPIFFMPGTIGLLFHEFAVVVSLAVLVSMAVS
LTLIPLFASRFLKPESEVETQAAWSRWFEAGFNRLLNGYQRSLAIALRHQRWMLLLTFAT
FAATAALYINAPKGFFPQEDIGQIQASMDAAPDISYPALLVLQQKAAKAVLENPNVATVA
SSLGSSGSGGRLFITLKPRSERENMAKTLDSLRKTTGKIAGVSVFYRPTQNLQIGGRSGK
SSYQYTLQAVNSDDLETWADKLKAALAGQAIFRDVTSDSEQKTLQAKINIDRDRASELGI
NMQNLRETLYAAYGEREVATIYAPQDSYSVLMQLKDSARSDENALSQLKVRSSSGMLVPL
SSFASVERTAVTTSINHQGQLPAITLSFNLAEGASLSDAAREIKAAESAINLPSSIFGAF
AGDAALYQQTQTSQLWLILIAVAVIYVVLGVLYESWIHPITILAGIPSAAIGALIALQIT
GLELTFIAMIGILLLVGIVKKNAIMMIDFALEAQRNQNLPALDAIREASAKRFRPIMMTT
LAALMGALPLALGLGAGAELRQPLGVSIVGGLIFSQLITLYITPVLFLTLERLSSKGISS
KSLP
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgagccacggtatttcttggtgggcgattcatcgccccgtggcgacgcttttgctgtgg
attgccgtcatggtcgctggcacgattgcgtggtttcatctacccatcgcagctctacca
acttacgacacaccaacgattagcgtatcagccagtcttactggtgcttcccctgaaacg
atggccaatgcggtagcaacgccactcgaaaaacaattttcgaccatccctggcttggcg
atgatgacgtcaaccagcaaattgggcagtaccaatatcacgctggaatttgcaccgagc
cgcgatatcgaatcggccgccgtcgacgtacaggcggcgctttaccgggcaaatcgtagc
ctgccatcggacatgaaaagtccgcccagctatcgtaaagtcaacccatcggatgcgcca
attttgatgctcagcatcaattcgccgtccttgtcgctctctgaactcaatgattattcc
gataatctgattggtcccgcgctttcaacgattgatggcgtggcgcaggtaacgatttat
ggtcaaaaacgttttgcagttcgagtctcggtcgacccagatttactcgcggcacgtgat
ttatccctgccagaactagcagcagcactcaaaacggccaatgctaattcgccagtcggt
caactcgaaggcgagcggcaaacattgatgctgcaagccaatgagcaacttaaaaatgcc
gcagaatttagcagcctagtcgtagccaatagaaatggtttacctgtgcgcttaggcgat
gtggccaccgtcgaagacagcgtggaaaacatcaaatcaggcagctggattgatggtcaa
cgctcgatcattttggctattttgcgccaacctggtgccaatacagtggcgactgtcgac
gcgattaacgcgatgctgccacgattgattgcacagatgccagaatccgttgaagtcaaa
aagctgaacgatagatcaacctcgattcgcgaatcgattcacgacgttacactgacgctg
attctgacgatgggcttggtcgtgctgtcggtcatgctgtttttacgccgagcagctgcc
acattgataccctcggtatcgctccctatctcaatgctggcaacgtttgcattgatgtac
tggcttgggtatagcctcgacaacatttctctcatgggtttaaccgttgcccttggttta
gtcgttgacgatgccattgtggtactcgaaaacatcgttcgccacattgaagaaggaatg
caaccgtgggatgccgcgattaagggcgctggcgaggttgcattcacggtagtttcaatt
tcaatttcattgatcgccgtcttcatcccgatcttttttatgccgggcaccattggattg
ctgttccatgaatttgccgtcgtcgtgtcattggccgtcttggtgtcgatggccgtttca
ctcacgctgattccactctttgcctcgcggtttttaaaaccggaatcagaggttgaaacc
caagccgcttggagccgttggtttgaggctggttttaatcgtttactcaatggctatcaa
cgcagcttggcgatcgccttgcgccatcagcgctggatgctattgctcacctttgccact
tttgccgccaccgctgcgctctacatcaacgcccccaaaggcttcttcccgcaagaagac
atcgggcaaattcaagcgagtatggatgcggcaccggatattagttatcccgcgctatta
gtgctgcaacagaaagccgccaaagcagtgcttgagaatccgaacgtggccacagtggcc
tccagcttaggcagtagtggtagcggtgggcgcttgtttatcacacttaaaccccgtagc
gaacgggaaaacatggccaaaacactcgatagcctgcgcaaaacaaccggaaaaatcgca
ggtgtcagtgtgttttatcgtccaacacaaaatctgcaaattggtggccgcagcgggaaa
agcagctatcaatatactttgcaggccgttaactccgatgacttggaaacttgggccgac
aaactaaaagccgctttggctggacaagccattttccgtgatgtcacttcggattcagag
caaaaaacgctgcaggccaaaatcaatattgatcgagatcgcgccagcgagctgggcatc
aatatgcaaaatctacgcgaaacgctgtatgccgcttatggcgagcgtgaagttgccacc
atttacgcgccgcaagacagctattcagtgctgatgcagctcaaagacagcgctcgcagt
gatgaaaatgcgctcagccagttaaaagtccgcagcagttctggcatgctcgtaccatta
agcagctttgccagcgttgaacgcaccgcggtcaccacttcgattaatcaccaaggtcaa
ctacctgcgattaccttgtcgtttaacttggcagaaggtgcgtcactatcagatgctgcg
cgtgaaatcaaagcggcagaaagcgcgattaatttaccaagctcgattttcggtgcgttt
gccggcgatgccgcgctctaccaacaaacgcagaccagccaattatggctaattctgatt
gcggtagcggttatttatgtcgtgctcggcgtgctgtatgagagctggattcatcccatc
accattttggcgggtattccatcagcggcaattggcgcattgattgcactacaaatcaca
gggctagagctgacctttattgcgatgatcgggattttgctgctggtcggcattgtgaag
aaaaacgcgattatgatgatcgactttgcactagaagcacagcggaatcaaaatttgcca
gctttggatgcgatacgtgaagccagcgccaagcggtttagaccgattatgatgaccacc
ttagcagcgctgatgggggcattgccactggccttgggcttaggtgcaggggcagaacta
cggcaaccccttggtgtgtcgattgtgggtgggctaattttttcgcaattgatcactctg
tacatcacgcccgtactatttttaactctggagcgactaagtagcaaaggtatatctagc
aaatctttgccataa
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