Deefgea tanakiae: K4H28_02450
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Entry
K4H28_02450 CDS
T08586
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk03030
DNA replication
dtk03430
Mismatch repair
dtk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K4H28_02450 (holA)
03430 Mismatch repair
K4H28_02450 (holA)
03440 Homologous recombination
K4H28_02450 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtk03032
]
K4H28_02450 (holA)
03400 DNA repair and recombination proteins [BR:
dtk03400
]
K4H28_02450 (holA)
Enzymes [BR:
dtk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K4H28_02450 (holA)
DNA replication proteins [BR:
dtk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K4H28_02450 (holA)
DNA repair and recombination proteins [BR:
dtk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K4H28_02450 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
DUF7759
Motif
Other DBs
NCBI-ProteinID:
QZA78297
LinkDB
All DBs
Position
complement(518765..519784)
Genome browser
AA seq
339 aa
AA seq
DB search
MRTDELAAAVKRKLAPLYMIHGDESLLCLEAVQTLRDTARQQGYSEREVLTVENAAHFQW
GQLTAGQSLSLFAEQRILELRIPNGKPGIEGGKALEAFAQNLPSDTLSIITLPKLDKTAL
NSKWMTALTKAGEVIEAKQIDRQALPQWINARLAKQHQSLSQDAMEWLVDRVEGNLLAAL
QEIQKLALLHPAGQLSLADLEAAVANVARYDVFQLGEAVLIGDAERLAHMLAGLQAEGES
PVLVLWALTEETRNLYRFAQGRARQIPTAQLIKELRLWGNKQRLIEPAVERVNRRILTQA
LQKAAIIDGLIKGIGTGDVWQELSTMAVSLSKTPPTTSK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactgatgagctcgccgcagcagtcaagcgcaagctagcaccgctatatatgatt
catggtgacgaaagcttgctttgcctagaggcggtacaaacgctacgcgatacagcacgg
caacaaggctattcagaacgtgaagtactcaccgtggaaaatgccgcccatttccagtgg
gggcaacttaccgccgggcaatcgttatcactatttgccgaacaaagaatacttgaactc
cgcatacccaatggcaagccaggaatagaagggggtaaagcgctagaagcctttgcacag
aatcttcctagcgatacactctcgattattacactacccaaactcgacaaaaccgcactt
aatagcaaatggatgactgcgctgaccaaagccggagaagtcatcgaagccaaacaaatt
gatcgacaagcattgccgcaatggattaacgcccgcttggcgaaacagcatcaaagccta
agccaagatgcgatggagtggttagttgaccgagttgaaggcaatctgctcgccgcgtta
caagaaatccaaaaattagccttgttgcatcccgcaggccaactcagcttggccgacttg
gaagcagcggtcgccaatgtggcgcgctatgatgtgtttcaacttggtgaagcagtactg
attggcgatgccgaacggcttgcccatatgctggcaggattgcaagccgagggcgaatca
cccgtcttggtgttgtgggcgctcactgaagaaacacgcaacctgtaccgcttcgcccaa
ggccgcgcacgtcaaatacctactgcccaactcattaaagagctcaggctatggggaaat
aagcaacgtttgattgagcctgcagtcgagcgcgtcaatcgccgtatactgacgcaagca
ctgcaaaaagcagcaatcatcgatggtctaattaaaggcatcggcaccggcgatgtgtgg
caggaactaagcaccatggctgtttcgctcagcaaaaccccacctacaacttcaaaataa
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