KEGG   Deefgea tanakiae: K4H28_05015
Entry
K4H28_05015       CDS       T08586                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dtk  Deefgea tanakiae
Brite
KEGG Orthology (KO) [BR:dtk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dtk03016]
    K4H28_05015 (truB)
Enzymes [BR:dtk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     K4H28_05015 (truB)
Transfer RNA biogenesis [BR:dtk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    K4H28_05015 (truB)
 Prokaryotic type
    K4H28_05015 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: QZA78770
UniProt: A0ABX8ZAE3
LinkDB
Position
1052703..1053614
AA seq 303 aa
MAKRKIDGVLLLDKPFGFSSNGALLKCRWLLQAEKGGHTGVLDPFATGLLPLCFGEATKF
AQRMLDADKGYRATITFGQVSTTLDGEGEITVSGVAPSGLDQILPVLQQFVGPIIQTPPM
YSALKVDGKPLYEYAREGVVLERKSRPVTIYEMTVVSYEAPVLVVDVLCSKGTYIRVLAE
DIGNALGCGGYLSGLRRTLTGGFKLEDAITLDEYIALEMPEREAMLLPGEQLIAELPSFE
LNLAQTALMRNGMPILDAINAPLGELRLYGNSEKLDNPMFIGLGEVGADGVLRPKRLLST
HVA
NT seq 912 nt   +upstreamnt  +downstreamnt
atggccaagcgtaaaatcgatggggttttgttgctggataagccgtttggtttttcgagt
aatggtgcgcttttaaagtgccgctggttattacaagcggaaaagggcggtcataccggt
gtgcttgatccatttgcaacggggcttttgcccttgtgttttggcgaggcgactaaattt
gctcagcggatgttggatgctgataaaggttatcgcgccacgattacttttggacaggtt
tcgacgactttggatggtgagggtgaaattaccgttagtggtgttgcgcctagtggcctt
gatcaaatattgccagtattgcagcagtttgttggtccaatcatccaaactccccctatg
tattcggcgctaaaggttgatggtaaaccgttgtatgaatatgcccgtgagggtgttgtt
ttagagcggaaatctcggccagtcacaatctatgagatgactgtggtgtcttatgaggca
ccggtgctagtggttgatgtattgtgctcgaaagggacttatattcgtgttctggcagaa
gatattggcaatgcattgggttgcggtggctatttatcgggcttgcgccgcacattaacg
ggtggttttaagttagaagatgcaatcactctggatgaatatatcgcgctcgaaatgcct
gaacgagaggctatgttgttgccgggtgaacaactgattgctgagttaccgagctttgag
cttaatttggcgcaaacggcgttgatgcgaaatgggatgccgattctggacgcaattaat
gccccgcttggggagttaaggctttacgggaactcggaaaagttagataatcctatgttc
attggtttgggtgaagtgggcgctgatggcgtgctgcgacccaaacgactgctttctacc
catgtggcgtag

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