Deefgea tanakiae: K4H28_05315
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Entry
K4H28_05315 CDS
T08586
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K4H28_05315 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtk03019
]
K4H28_05315 (rnc)
03009 Ribosome biogenesis [BR:
dtk03009
]
K4H28_05315 (rnc)
03036 Chromosome and associated proteins [BR:
dtk03036
]
K4H28_05315 (rnc)
Enzymes [BR:
dtk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
K4H28_05315 (rnc)
Messenger RNA biogenesis [BR:
dtk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K4H28_05315 (rnc)
Ribosome biogenesis [BR:
dtk03009
]
Eukaryotic type
90S particles
RNase
K4H28_05315 (rnc)
Prokaryotic type
rRNA processing factors
K4H28_05315 (rnc)
Chromosome and associated proteins [BR:
dtk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
K4H28_05315 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DUF2999
WH_DRP
Motif
Other DBs
NCBI-ProteinID:
QZA78827
UniProt:
A0ABX8Z932
LinkDB
All DBs
Position
1124836..1125546
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AA seq
236 aa
AA seq
DB search
MSVVLPAERLQKTLGYVFSQPKLLKQALTHRSSSSTHNERLEFVGDGILNAVVARSLFLA
FPQLSEGDLSRLRAHFVRQESLAIIATELQLGDYLSLGEGELKSGGHRRPSILADALEAV
LGAIWLDGGFASAEAVLEKLFAARIAAVNPEEAMKDPKTSLQEWLQARKVDLPNYVIERQ
QGDSPDQIFEVSCTIGELKVTAKAEGASRRAAEQLAAGAVLHLLREQFPGKKVVRK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagttgtcttacctgccgagcgtttgcaaaaaacgctcggttatgttttttctcag
cctaaattgctcaagcaggctttgacgcatcgtagctcatcgtcgactcacaatgaacgc
ttggagtttgtcggtgacggcattttgaatgcagtggttgcacgcagtttatttttggcg
tttccgcaacttagtgagggagatttgtctcgcttacgagcgcattttgtgcggcaagaa
tcgctcgcgatcatcgcgactgagttgcagcttggtgattatttatccctcggagagggg
gagttaaagagtggcggtcatcgacgtccgagtattttagctgatgcacttgaggcagtt
ttgggggccatctggttggatggtgggtttgcttccgctgaagcggtattggaaaaatta
tttgctgcacgtattgccgccgtcaatccagaagaggcaatgaaagaccctaaaacttca
ctacaagaatggttgcaagcccgtaaagtagatttgcccaattatgtgattgagcgacag
cagggtgattcaccagaccaaatttttgaagtgagttgcactattggtgagctcaaagta
acggccaaagcagaaggggcaagccgacgtgctgcggagcagcttgccgctggtgccgtt
cttcatctattgcgcgagcaatttccaggtaaaaaggttgtgcgaaaatga
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