Deefgea tanakiae: K4H28_06310
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Entry
K4H28_06310 CDS
T08586
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K4H28_06310 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dtk01007
]
K4H28_06310 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtk03016
]
K4H28_06310 (lysS)
Enzymes [BR:
dtk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
K4H28_06310 (lysS)
Amino acid related enzymes [BR:
dtk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
K4H28_06310 (lysS)
Transfer RNA biogenesis [BR:
dtk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
K4H28_06310 (lysS)
Prokaryotic type
Other AARSs
K4H28_06310 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QZA79006
LinkDB
All DBs
Position
complement(1337644..1339158)
Genome browser
AA seq
504 aa
AA seq
DB search
MSEVKSQEVEVQVDENQIIAERRAKLAAIRAKGIAFPNDFKREHLSGDLHEQYNALEKDE
LEAKAISVSVAGRMMLKRVMGKASFATIQDNAGRIQFYISGNSVGEAVYDDFKTWDLGDI
VAARGTLMKTKTGELSIHVTELRLLTKSLRPLPDKHHGMADQEQIYRQRHLDLITNDVSR
GTFIKRSKIIQRLREFMVGENYLEVETPMMHSIPGGATAKPFVTHHNALDMPLYLRIAPE
LYLKRLIVGGLERVFEINRSFRNEGMSTRHNPEFTMIEFYEAYADYQRMMDMSEGIIRAC
AIEATGHAVVTYQGKVVDLSKPFARFTIAGAIKHYNPEYTDEQLNDRAFLKSEIARLGGK
PVLTDGIGGLQLSLFEENTEGKLWEPTFIVDYPAEVSPLARASDTQAGLTERFELFIVGR
EHANGYSELNDSEDQAARFQAQVDLKDKGDDEAMHYDADYVRALEHGMAPTGGCGIGIDR
LVMLLTDSPSIRDVILFPQMRRED
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagtgaaaagccaagaagttgaagtgcaagtcgacgaaaatcaaatcatcgct
gaacgtcgcgccaaattggcagcgattcgcgccaaaggcatcgccttcccgaatgatttt
aaacgcgaacatttatctggcgatctgcatgagcagtacaacgcgctagaaaaagacgag
ctcgaagccaaagcgatcagcgtttcggtagctggccgcatgatgctcaagcgcgtaatg
ggtaaagccagcttcgcaacaattcaagacaacgcgggccgcattcagttttatatcagc
ggcaatagcgttggcgaagccgtttacgatgatttcaaaacttgggacttgggcgatatc
gttgctgcacgtggcacattgatgaagaccaaaacaggtgaattgtcgattcatgttacc
gaactacgcctgctaaccaaatcactccgcccgctcccagacaagcatcacggcatggct
gatcaagagcagatttatcgacaacgtcatttggacttgattaccaatgacgtgagccgc
ggcacttttatcaaacgctcaaaaatcattcaacgcttgcgcgaatttatggtgggtgaa
aactacctcgaagttgaaacaccgatgatgcacagcattccgggtggtgcgacagccaag
ccattcgtgacgcatcacaatgcgctggatatgccgctttatttgcggattgcgccggag
ctgtacctaaaacgccttattgttggcggtcttgagcgcgtatttgaaattaaccgctca
ttccgtaacgaaggcatgagcacgcgtcacaacccagaattcacgatgatcgaattctac
gaggcatatgccgattaccagcgcatgatggatatgtcagaaggtattatccgcgcctgc
gcgattgaagcgactggccatgctgttgtgacctaccaaggcaaagtggttgatctttca
aaaccatttgcacgatttacgattgccggtgcaatcaagcattacaacccagaatacacc
gacgaacaactgaatgatcgtgccttccttaaatcggaaatcgcacgtcttggtggtaag
cctgttcttacagatggtatcggcggcctacaactgagtttgtttgaagaaaacaccgaa
ggcaaattgtgggagccaactttcatcgttgactatcctgccgaagtatcaccactggca
cgcgcatccgacacacaagcaggcttaactgagcgtttcgaattgtttattgtgggtcgt
gaacatgccaatggctattcggagttaaatgactctgaagatcaagccgcgcgcttccaa
gcccaagtagatttgaaagacaaaggtgatgatgaagcgatgcattacgatgcagactat
gttcgtgctctcgagcacggcatggcaccaactggtggatgtggcattggtatcgaccgc
ttggtcatgctactcactgactcaccaagcattcgtgacgtcattttgttcccgcaaatg
cgccgcgaagactag
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