Deefgea tanakiae: K4H28_06555
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Entry
K4H28_06555 CDS
T08586
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
dtk
Deefgea tanakiae
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtk03021
]
K4H28_06555 (rpoS)
Transcription machinery [BR:
dtk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K4H28_06555 (rpoS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
7TMR-DISMED2
Motif
Other DBs
NCBI-ProteinID:
QZA79054
LinkDB
All DBs
Position
complement(1396124..1397080)
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AA seq
318 aa
AA seq
DB search
MSDQLDILEEELVEEEDLAEVEAEDAEAEVDSKDESDRYTAESTGDVTQIYLNEIGQSKL
LTPDEERALSRRVVQGDFSARQKMIEHNLRLVVNIAKHYINRGMTLLDLIEEGNIGLMHA
LEKFDPERGFRFSTYATWWIRQSIERSIMNQSRTIRLPVHVIKELNVYLRAQRHLEASLG
HEPAIEDIAHLVGKDVEEVRRVMSLNERVASLDAPLDIDPMLSIGESIPDDQHDGPEAIL
QNSEVEKYVKEWLKQLNDKQRMVIERRYGLNGYEICTLEDLAANLSLTRERVRQIQIEAL
DQLRRILRRYGVSRDVVL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaactggatatattagaagaagaacttgttgaagaagaagacctggccgag
gtcgaagctgaagatgcagaagctgaggtagacagcaaggatgaatcagatcgttacacg
gcagaaagtactggcgacgttactcagatttatctaaatgagattgggcagagtaaatta
ctgacgccggacgaggagcgagcgctttcgcgccgcgttgttcaaggtgatttttctgca
cgacaaaaaatgattgagcacaatctgcgcttagtcgtaaatatcgccaagcactacatc
aatcgcggcatgactttgcttgatttgattgaagagggcaatattggcctgatgcacgca
ctggaaaaatttgatcctgagcgcggctttcgcttttcaacttacgcgacttggtggatt
agacaaagtatcgagcgctcaatcatgaatcagtctcgaactattcgcctgccagtacat
gttatcaaagagttaaacgtctatctgcgagcgcagcgtcaccttgaggcgagcttaggg
catgagccagctatcgaagatattgctcatctggttggcaaagatgtggaagaagttcgc
cgtgtaatgagcttaaatgagcgcgttgcttcgcttgatgcgccacttgatattgaccct
atgctatcgattggcgagtccattcctgatgatcaacacgatggtcctgaagccatcctg
caaaatagcgaagtagaaaaatacgtcaaagagtggctaaaacaacttaatgataagcaa
cgaatggtgattgaacgtcgctacggcttaaatggctatgaaatctgtacgctagaagat
ttggctgccaatttgagtttgacgcgtgaacgtgttcggcaaattcaaattgaggcgctt
gatcagttacgtcgaatcctgcggcgctacggagttagccgcgatgtagttctgtaa
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