Deefgea tanakiae: K4H28_06640
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Entry
K4H28_06640 CDS
T08586
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dtk
Deefgea tanakiae
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtk03032
]
K4H28_06640
03036 Chromosome and associated proteins [BR:
dtk03036
]
K4H28_06640
03400 DNA repair and recombination proteins [BR:
dtk03400
]
K4H28_06640
DNA replication proteins [BR:
dtk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K4H28_06640
Chromosome and associated proteins [BR:
dtk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K4H28_06640
DNA repair and recombination proteins [BR:
dtk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K4H28_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
QZA79069
LinkDB
All DBs
Position
complement(1416910..1417194)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIAKLAARYPQLVAKDAELAVKTILDAMARSLSQGQRIEIRGFGSFDLNYRPPRT
GRNPKSGTKVAVPEKFVPHFKAGKELRERVDLDA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagaactcatcgcgaaacttgctgctcgttatccgcagttggtggcaaaa
gacgcagagttagccgtaaaaacgatacttgatgcgatggcccgcagcctttcgcaaggc
caacgtatcgaaattcgtggatttggcagctttgacttgaattaccgcccacctcgtacg
gggcgcaatccaaagtctggtacaaaagtagctgtcccagaaaagtttgtgcctcatttc
aaggcgggtaaagagctgcgagaacgtgtcgatttggatgcgtaa
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