Deefgea tanakiae: K4H28_08840
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Entry
K4H28_08840 CDS
T08586
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk03030
DNA replication
dtk03430
Mismatch repair
dtk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K4H28_08840 (dnaE)
03430 Mismatch repair
K4H28_08840 (dnaE)
03440 Homologous recombination
K4H28_08840 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtk03032
]
K4H28_08840 (dnaE)
03400 DNA repair and recombination proteins [BR:
dtk03400
]
K4H28_08840 (dnaE)
Enzymes [BR:
dtk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K4H28_08840 (dnaE)
DNA replication proteins [BR:
dtk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K4H28_08840 (dnaE)
DNA repair and recombination proteins [BR:
dtk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K4H28_08840 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
tRNA_anti_2
Ribosomal_S13
DUF3173
Motif
Other DBs
NCBI-ProteinID:
QZA76455
UniProt:
A0ABX8Z5J3
LinkDB
All DBs
Position
1882345..1885788
Genome browser
AA seq
1147 aa
AA seq
DB search
MNAPAYIHLRLHSEFSVSDGIVRLEDAVKRAKADKMPALGMSDLMNLFGLVKHYKACRNA
GIKPIIGLDAWIENPDNRDKPFRTLLICKNRDGYGRLCELITMAFRDNQYRGRGELKKEW
FTAGDNSGLIALSGAELGEIGQQFLANNSDLATTAAQWWSAQFPNSFYLEIQRTGTQASE
TSLQRQLDLAGDLNLPVVATHPIQFMDPDDFKAHEARTCISAGFVMNDKRRPKDFTEEQY
FKTTAQMQELFADLPEALANTVTIAQRCNIEIVLGKNVLPPFPTPEGMTLDDFLVYEAKR
GLEMRLAQLYLDEAEREAERPRYYERLKIETDTIINMGFPGYFLIVADFIAWGKVNGCPV
GPGRGSGAGSLVAYSLGITDIDPTAYALLFERFLNPERVSMPDFDIDFCQENRWRVIEYV
REKYGADAVSQIATFGTMAAKAVVRDVGRVLDLPYMFCDGVSKLIPAAPGKQYSLDDALE
MVPELAERVEREEELKELWELAKKLEGLTRNIGMHAGGVLIAPNKITDFCPVYQAAGDDA
SPVSMLDKDDVEAVGLVKFDFLGLRNLTIIELALQYIKTQTGEYLDLMSLGFGDQAAYQV
FRDANTTGVFQVESDGMKRLLEKLAPDRFEDIIAVLALYRPGPLGSGMVDTFINRKKGLE
APDYFHPDLEKCLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKPEEMAKHR
ETIAEGAAKQGYDPKLAETLFDLMTKFAEYGFNKSHTAAYAVVSYHTAWLKAHHTAAFMA
ATMSSELDNTEQLKVFYDDCLDKKNKLVILPPDLNESFYRFVPVGKKQIRYALGAIKGVG
ESAVNMIVAEREKNGPFKDLYDLCSRTDKKEVNKRVVDALIRGGAFDALEPNRAKLMANV
EQAMAVAEAELANANQCSLFDMLEPAAAPQIEHIEAEPWDEKIKLAEEKTAIGFYLSGHP
FDAHAKPIKGLIRTRLDRLQNQREPQFIAGIVAGMRIKNGDRGRMCFLQLDDGHAKVELT
LYSESYEANRTKLKEDTLLVIEAKVSEDRFSGGQRIIADRVFDLAEARSHFARALKINMG
SEADAARLKQLLAPHTAEHGCAVEIDYQNTEARCQMTLNHAWRILLRDELLADLRDWLGP
QAAEPRF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacctgcttatatccatctacgcctccattccgagttttcagtttctgacggc
attgttcgtttagaagatgccgtcaaacgcgccaaagccgataaaatgccggcgcttggc
atgtcggacttgatgaatctttttggtctggtcaaacattacaaagcctgccgcaacgca
gggattaagccgattattggcttggatgcgtggatcgaaaatccagataatcgcgacaaa
ccgttccgtacgctgctgatttgtaaaaatcgcgatggttatggtcgtttgtgcgaactg
attacgatggcatttcgcgataatcaatatcgcggccgtggtgagctaaaaaaagaatgg
tttaccgcaggcgataatagcggcctgattgcgctgtctggcgcggagctgggcgaaatc
ggccagcagtttttggctaataattcagacctcgccaccaccgccgcccaatggtggtcg
gcgcagttccctaatagtttttacttagaaattcagcgcaccggtacgcaagcgagcgag
accagcttgcagcgccagctcgatttggcgggtgatctcaatctgccggtggtcgcaacg
catccgatccagtttatggatccggatgattttaaagcgcatgaagcgcgcacctgcatt
tcggcgggatttgtcatgaacgacaaacgtcgccccaaagattttaccgaagagcaatat
ttcaaaaccaccgcacaaatgcaggaattgtttgccgatctgcccgaggcgctggccaat
acggtaacgattgctcaacgctgcaatattgagattgtgctcggcaaaaacgtattacca
ccgttccctacacccgaaggcatgacgctggatgatttcctggtgtatgaggccaaacgc
ggactagaaatgcgccttgcgcagctatacctcgatgaagctgagcgtgaagccgagcgc
cctcgttattacgaacgactcaaaattgaaaccgataccattattaatatgggcttcccc
ggttactttttgatcgttgctgactttatcgcttggggcaaagtcaacggctgcccagtg
ggccccggccgtggttcaggtgcgggttcgctcgttgcctacagccttggcattaccgat
attgatccaaccgcctatgccctgctgtttgagcgctttttgaatccagaacgcgtttca
atgcccgactttgatatcgatttttgccaagaaaatcgctggcgcgtcattgaatacgtg
cgagaaaaatacggcgctgatgcggtgagccagattgcgactttcggtacgatggcggcc
aaagcggtggtgcgcgacgtcggccgtgtgctggatttgccgtatatgttctgcgatggg
gtttccaaactgattcctgccgcgcccggcaagcaatatagtctggacgatgcgctggaa
atggtgccagaactcgctgagcgcgttgagcgcgaagaagaactcaaagaactgtgggag
ctggccaaaaaactcgaaggcttaacgcgtaatatcggtatgcatgccggtggcgtgttg
attgcaccgaataaaatcactgacttttgccctgtctatcaagccgcaggcgacgatgca
tcgccagtatcgatgctcgataaagacgacgttgaagccgttggcttggtgaaattcgac
tttttgggtctgcgaaatctaacgattattgaactcgcgctgcaatacatcaaaacgcaa
acgggcgaatatctggacttaatgagtctgggttttggcgatcaagctgcgtatcaagtt
ttccgcgatgccaataccaccggcgtgtttcaggtcgagtcagatggtatgaaacgcttg
ctcgaaaagctggcacccgaccgttttgaggacattattgcggtattggcgctgtaccgt
ccgggtccgctcggctcgggcatggtcgacacctttattaatcgtaaaaaaggtcttgaa
gcgcccgactatttccaccctgaccttgaaaaatgtttggaaccgacttacggcgttatc
gtgtatcaagagcaggtgatgcagatttcgcagattatcggtggctatacgctcggcggc
gccgatatgttgcgccgtgcgatgggtaagaaaaagccggaagaaatggccaagcatagg
gagacgattgctgagggtgcggccaagcaaggctacgatccaaaactcgccgaaaccttg
tttgacttgatgaccaagtttgccgagtacggttttaataaatcgcataccgcggcgtat
gccgtggtgtcgtatcacacggcatggctaaaagcccatcatactgccgcgtttatggcg
gcgacgatgtcgtccgagctagataataccgaacagctcaaagtgttttatgacgattgc
ctcgacaaaaagaacaaactcgtcatcttgccacccgatttaaatgaaagtttttatcgc
tttgttcccgtaggcaaaaaacaaattcgctacgcactcggcgcgattaagggcgtgggc
gaaagtgcagtcaatatgattgtggccgagcgggagaaaaacggcccatttaaagacttg
tacgatttatgcagccgaacggataaaaaagaagtgaataaacgcgtggtcgatgcgctg
attcgcggcggtgcttttgatgcgcttgagcccaatcgcgccaaactcatggccaacgtc
gagcaagcgatggccgtcgccgaagcggagctggccaatgccaaccaatgcagtctgttt
gacatgctcgagccggctgccgcgccgcaaattgagcacattgaagccgagccgtgggac
gaaaaaatcaaactcgctgaagaaaaaactgcgattgggttttatctatccggtcatcca
tttgacgcgcacgccaaaccaatcaaaggtttaatccgtacacgactggatcgcctgcaa
aatcaacgtgaaccgcaatttattgcgggtatcgtcgctggcatgcggattaaaaatggc
gaccgaggtcggatgtgctttttgcagctcgacgatggtcatgccaaagtcgagctgacg
ctgtattcggaatcctatgaagccaatcgcaccaagctcaaagaggacacgctgctggtc
atcgaggccaaagtctccgaggatcgtttttctggcgggcagcggattattgccgatcga
gtctttgatcttgccgaagcgcgcagccatttcgcgcgtgccttgaaaatcaatatgggc
agtgaagccgatgccgcgcgactgaaacaattactcgctccgcacaccgcagagcatggc
tgcgctgttgaaattgattatcaaaataccgaagcacgctgccaaatgactttgaatcac
gcttggcggattttattacgcgatgaattattagccgatttacgcgattggttaggccca
caagcagccgaacctcgcttctaa
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