Deefgea tanakiae: K4H28_09660
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Entry
K4H28_09660 CDS
T08586
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dtk
Deefgea tanakiae
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtk03032
]
K4H28_09660 (topA)
03400 DNA repair and recombination proteins [BR:
dtk03400
]
K4H28_09660 (topA)
Enzymes [BR:
dtk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K4H28_09660 (topA)
DNA replication proteins [BR:
dtk03032
]
Prokaryotic type
DNA Topoisomerases
K4H28_09660 (topA)
DNA repair and recombination proteins [BR:
dtk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K4H28_09660 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF5795
Motif
Other DBs
NCBI-ProteinID:
QZA76596
LinkDB
All DBs
Position
complement(2052591..2054891)
Genome browser
AA seq
766 aa
AA seq
DB search
MPANLLIVESPSKAKTLQKYLGKDFQILASYGHVRGLVRKSGSVDPEKDFKMKYQVIEKN
KKHVDAICDAVEAADHVYLASDPDREGEAISWHIMEILKAKKLISPEKTFKRVVFHEITE
TAVLHAVANPRDIDFNLVNAQQARSALDYLVGFNLSPLLWRKVRTGLSAGRVQSPALRLI
CEREIEIRAFNPQEYWSIHLDTKKGRSKVAAKLTTWQGKKLDQFDIPNEAEQTTILNGLA
GKDAVVHSVEKKKKSRSPAAPFTTSTLQQEAVRKLGFTTDRAMRTAQQLYEGINLGGETV
GLITYMRTDSVALSNDALAEIRGYISEHFEKEYLPKDAIAYKNKAKNAQEAHEAVRPTSI
HRTPESVKTFLSPEQFKLYQMIWKRTLSCQMTSAKFDTVAVDIAVGGPENLFRATGQTLV
FPGFIAVYQEDADDVDDDEDEARLPVMTEGDALPVEKIFGEQHFTQPPPRFTEASLVKSL
EEFGIGRPSTYASIIFTLKDREYVILDKKRFTPTDTGEVVNKFLSEHFTQYVDYNFTAKL
EDKLDEISNGSREWIPVLDEFWLKFHKQVEEKQALSRAEATHEAMDEDCPKCGKHKLSIR
LGRRGRFISCSSYPECDYTRNIGDDPNAAPLEPEVVPDRTCPKCESPLHIKLGRYGKFIG
CSAYPKCKHIEPLEKPKDTGIECPECHKGSLIERKSRYGKLFYSCNTYPDCKYATWNPPV
AEACPQCKWPIMTIKVTKRRGTEKVCPQKECGYSEVLIPPPEKEPK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaatctcttaatcgttgagtcgccttcgaaagcgaaaactctgcaaaaatat
ttaggtaaagactttcaaattcttgcctcctatggtcacgtccgtggattagttcgtaaa
tcgggctcggttgaccctgaaaaagacttcaaaatgaagtatcaggtcatcgaaaaaaac
aaaaaacatgtggatgcgatttgcgatgcagttgaagctgctgaccacgtttatctcgca
tccgatccggaccgcgaaggtgaggccatttcttggcacatcatggaaattcttaaggcg
aaaaaattaatcagccctgagaaaacgtttaaacgcgttgtgtttcacgaaattacagaa
actgcagtgttgcacgcagtcgctaacccgcgcgatatcgatttcaatttggtgaacgcg
cagcaagcgcgtagtgccttggattatttagtaggctttaatttgtcgccattgctatgg
cgaaaagtgcgaaccggtttgtctgcagggcgggtacaaagccctgcgctgcgcttaatc
tgcgagcgcgagatcgagattcgtgcttttaatccgcaagaatattggtcgattcatctc
gataccaaaaaaggtcgaagcaaagttgcagctaagctcaccacgtggcaaggcaaaaag
ctcgaccaatttgatattcccaatgaagctgaacaaaccaccatcttaaacggcttggcc
ggcaaagatgccgtagtccactcggttgaaaagaaaaagaaatcccgcagcccagctgcg
ccatttactacgtcgactttgcagcaagaagcggtgcgtaaactgggtttcacaactgat
cgtgccatgcgtactgcgcagcagttgtacgaaggtattaatcttggcggtgaaacagtc
ggcttgatcacctatatgcgtaccgattcggtcgccttatcgaatgatgccttggcagaa
attcgtggttatatcagtgagcattttgagaaagagtacctgccaaaagatgcaatagct
tataaaaataaagctaaaaatgcacaagaagcgcatgaagcggtacgcccaacgtcgatt
catcgtacgccagaatcagtcaaaacattcttgtcgcctgagcaatttaagctgtatcaa
atgatttggaagcgcacgctatcctgtcagatgacctcggccaagtttgataccgttgct
gtggatattgcagtgggcggtccagaaaacttgttccgtgcaacggggcaaactttggta
tttcctggctttatcgccgtgtatcaagaagatgccgatgatgtggatgacgatgaagac
gaagcacgcctaccggtaatgaccgaaggtgatgcgctgccagtcgaaaaaatcttcggc
gagcaacattttacacagccaccaccgcgttttaccgaggcgagtttggtgaaatcgctc
gaagagttcggcattggtcgaccttcaacctacgcatcgattattttcacgttgaaagat
cgtgaatatgtcattttggacaaaaaacgcttcacaccgaccgataccggtgaagtcgtg
aataagtttttgtctgagcattttacgcagtatgtagattacaatttcactgcgaaattg
gaagacaaactcgatgaaatttcgaatggtagccgcgagtggatcccggttcttgatgag
ttctggcttaaatttcacaagcaagttgaagaaaaacaagcgctttcgcgggcagaagca
acgcatgaagcgatggatgaagactgcccgaaatgtggcaagcacaaactgtcaattcgc
ttgggtcgccgtggtcgttttattagttgcagttcttatccagagtgcgattacacgcgc
aatattggcgatgatcctaatgctgcgccgcttgagcctgaagtcgttcctgatcggacg
tgcccgaaatgcgagtcaccgctgcatatcaagttgggtcgttacggtaaatttattggc
tgctcggcttatccaaagtgcaagcacattgagcctttagaaaaaccgaaagacacgggg
attgaatgtcctgagtgccataaaggcagcctgattgagcgtaagagccgttacggtaaa
ttgttctattcatgcaatacttatccagattgcaaatacgcaacgtggaatccaccagta
gctgaagcttgtccgcaatgtaaatggccgattatgacgattaaagtcactaagcgccgt
gggaccgaaaaagtttgtccgcagaaagaatgcggctacagtgaagtattaataccgccg
ccagaaaaagaaccaaaataa
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