Deefgea tanakiae: K4H28_12300
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Entry
K4H28_12300 CDS
T08586
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K4H28_12300 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtk03021
]
K4H28_12300 (rpoA)
03400 DNA repair and recombination proteins [BR:
dtk03400
]
K4H28_12300 (rpoA)
Enzymes [BR:
dtk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K4H28_12300 (rpoA)
Transcription machinery [BR:
dtk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K4H28_12300 (rpoA)
DNA repair and recombination proteins [BR:
dtk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K4H28_12300 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QZA77070
UniProt:
A0ABX8Z7C9
LinkDB
All DBs
Position
complement(2653357..2654340)
Genome browser
AA seq
327 aa
AA seq
DB search
MQINANDLLKPRIIDVQAVASAHAKVVMEPFERGYGHTLGNALRRILLSSMPGYAPTEVK
IEGVVHEYSALDGVQEDVVDILLNLKGVVLKLHGRDSVTLTLSKEGEGIVTASDIQLPHD
VEVINPDHVIAHLSAGGKLNMEVTVEKGRGYQPAPARLNKEEGRTIGTVMLDASFSPILR
VSYQVESARVEQRTDLDRLIIDIETNGVIEPDEAVRQAARMLIDQLGVFADLEGTPEVTV
AEPTITIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKAPNLGRKSLNE
IKEVLASKGLSLGMRLENWPPAGLDKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaacgcaaacgacttgctcaaaccgcgcatcatcgacgtacaagctgttgca
tctgcacatgctaaagttgtgatggagccttttgagcgtggttatggccatacgctcggt
aatgcattacgccggattctactttcttcaatgccgggttatgccccgacagaagtaaaa
attgaaggtgtagtgcatgaatactccgcgcttgatggtgtacaggaagacgttgttgac
atcctgctaaaccttaaaggcgttgtgctcaagctgcatggtcgggactctgttactctc
actctctcaaaagagggtgagggtattgttacggcgtccgacattcagcttccgcacgat
gttgaagtgatcaatccagaccatgtgattgctcatctttctgctggtggtaagctcaac
atggaagttacagttgaaaaagggcgtggttatcaacctgcccctgctcgattgaacaaa
gaagaaggacgtaccattggtactgttatgctggatgcatcgttcagcccaattcttcgt
gttagctaccaggtagaaagcgctcgtgtcgaacagcgtaccgatcttgaccgtttgatt
attgacattgaaactaatggcgtaatcgaaccggatgaggcagttcgccaagccgcacgg
atgttaattgaccaacttggcgtttttgctgatttggaaggtacgccagaagtaactgtt
gcagaaccaacaatcacaattgatcctatcttgcttcggcctgtggatgatcttgagttg
actgtacgttcggcaaattgccttaaagcggaaaacatctattacattggcgatctgatt
caacgtacagagactgagttgttaaaagctccgaacctgggtcgtaaatcgctgaatgag
atcaaagaagtgcttgcttcgaaggggcttagccttggcatgcgcctcgaaaactggcct
ccggctggcttagataagccttga
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