Deefgea tanakiae: K4H28_12645
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Entry
K4H28_12645 CDS
T08586
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dtk
Deefgea tanakiae
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtk03016
]
K4H28_12645
Enzymes [BR:
dtk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
K4H28_12645
Transfer RNA biogenesis [BR:
dtk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K4H28_12645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QZA77128
LinkDB
All DBs
Position
complement(2717508..2719367)
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AA seq
619 aa
AA seq
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MNVFYEEDGSFKVATIQDEQPASLQVEDTRGKRSKIKAANVLLKFDKVSLDDFSKAAQSE
AAEIDVTLLWECCGGDELSFTAIAAEYFGKNPSLIQQAAAAIALHAAPMYFYRKGRGNYK
AAPEENLKAALAGQERKQREAEQMAAWQTELQAGMLPEAFKPLLAKLIHRPDKNGLEYKA
LAAAAEAAQTSTLRLLDKVGAIPNIAQYFLDGFLAEQFPKGRGFAAFEPVTAPEDLPIAD
VKAFSIDDATTTEIDDAFSLQKLKNGNWQVGIHIAAPVLGIAPGSALDQVVLDRLSTVYF
PGDKITMLPDDAVDVFTLEEGAARPAVSMYLEVSLGFDILSYRSVIERVPVVANLRHHDI
EPYFNEETAGQDVPDYAWKDELNFLWHFAGALEGRRGKADQPQQTRMDYNFYIDRDEVDS
VTSEKVRIVPRKRGAPMDKLVAELMILVNSQWGKELRDADVAGIYRSQGGGRVRLSTQAT
AHAGLGVDCYMWSSSPLRRAVDYINQQQLVAMLRSEKPRYQKNDAELFTAISSFDAAYAA
YADFQDKMERYWCLRYMEQENLKDFNAQVIKENLVRIDGMPLVMRVGGLPELPAGTTVAL
QRLNIDYLDLTVEMRLARM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttttacgaagaagatggcagctttaaggttgcaacgatccaagacgagcaa
ccggcgagtttgcaagtggaagacacgcgcggcaagcgcagcaaaatcaaggccgccaat
gttttgctgaagttcgataaagtcagcttggatgatttttcaaaagccgcgcaaagcgaa
gcggctgaaatcgacgtcacccttttatgggaatgttgcggcggcgatgagttgagcttt
actgcgattgcggccgaatatttcggtaaaaacccaagcctgattcaacaagcggcagcc
gctatcgcgctgcacgcggcaccaatgtatttttatcgtaaaggtcgtggcaactacaaa
gccgcaccggaagaaaacctgaaagctgccttggcagggcaagagcgtaaacagcgcgaa
gccgagcaaatggcggcatggcagaccgagctgcaagcaggtatgttgccagaagcattt
aagccgttgctcgccaagttaatacatcgtccagataagaatggtttggaatacaaagct
ttggcggcagctgccgaagccgcgcaaacttcgactttgcgtttgctcgataaagtcgga
gccattccgaatatcgcgcaatatttcctcgatggctttttggcagaacagttcccgaaa
ggccgaggttttgcagcatttgagcctgtgactgcgcccgaagatttaccgattgccgat
gtcaaagcattctcgattgatgatgcgacaacgactgaaatcgacgatgcgtttagtctg
caaaaattgaaaaacggcaactggcaagtcggcattcacattgccgcgcccgtgctcggc
attgcgccgggctctgcactcgatcaagtggtgcttgatcgcctctcgacggtgtatttc
cccggcgacaaaatcacgatgctgccagatgacgcggtcgatgtgtttacgctggaagaa
ggtgcggcacgccctgcggtgtcgatgtatttggaagtgtcgctcgggtttgatattttg
agctatcgctcagtgatcgagcgcgttcccgtcgttgccaacttgcgtcatcacgatatc
gagccgtatttcaacgaagaaactgcaggccaagatgtgccggattacgcttggaaagac
gagctgaatttcttgtggcattttgctggcgcgctcgaaggccgccgtggcaaagccgat
cagccgcaacaaacgcgaatggattacaacttctatattgaccgcgacgaagttgatagc
gttaccagcgagaaagtccgtatcgtgccgcgcaaacgcggtgcgccgatggataagctc
gttgccgagttgatgattttggtgaatagccaatggggcaaagagctgcgcgatgccgat
gtcgccggtatttatcgctcacaaggcggtggccgtgttcgcctgtcgacgcaagccaca
gctcatgcgggcctaggtgtagattgctatatgtggtcgagctcgccgctacgccgtgcg
gtcgattacatcaatcagcagcaactcgtcgctatgctacgcagtgaaaagccgcgctat
caaaaaaatgacgctgaattatttacggcgatctcgtcatttgatgccgcgtatgccgcg
tatgctgatttccaagataagatggagcgctactggtgcttgcgctacatggagcaggaa
aacctgaaagactttaacgcgcaagtgattaaagaaaacttggtgcgcatcgatggtatg
ccactggtgatgcgcgtgggcggcttgccagaattgccagctggaactacggtggcattg
cagcgtctaaatattgattatctcgatttaaccgtagaaatgcgtttagctcgcatgtaa
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