Deefgea tanakiae: K4H28_12770
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Entry
K4H28_12770 CDS
T08586
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk00550
Peptidoglycan biosynthesis
dtk01100
Metabolic pathways
dtk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K4H28_12770 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K4H28_12770 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dtk01011
]
K4H28_12770 (mrdA)
Enzymes [BR:
dtk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K4H28_12770 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
dtk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K4H28_12770 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QZA77153
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Position
2744559..2746481
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AA seq
640 aa
AA seq
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MNKKVVLNQKGERFAFQIRLIVAVLFILTMFGVLLGRFVWLQVAEHNRYLTLAEQNRISL
VPIPPSRGIIRDRNGVVLAHNFSAYTLEITPSKVADLEDTIARLKGVVDITQKDRRRFKK
LQDETKDFETLPIRTRLSDEEVARFASQSYLFPGVELKARLFRHYPMGEVGSHLTGYIGR
INDRDIKDLEEKGIYANYRGTDYIGKLGIESSYEEQLHGKTGFEKVEIDSGGRAVRTLSR
TPPKSGQDLTLSIDIRLQEMVEKQFGNRRGALVAIDPRTGGILALVSKPGFDPNLFVDGI
DPVSWNELNTSIDKPLLNRAIRGEYPPGSTYKPFIALGALEYKLPIVNQTISDPGYFMYG
GHRFNDSKKGGYGSMSFDRSIALSSDTYFYQLAVQMGIDKIAGFMSTMDFGNKTGVDLPG
ERPGILPSPEWKKQRFKNPAQKKWFSGETVSIGIGQGYNSFTPMQMAHATATLANRGVAF
KPHAVATLTDPSTGKMTLVEPKPNKTMDWKPENIERIIRGMEGVMTIGTGANVFRGAEYV
SAGKTGTAQVYSLKGAKYNANAIKERLRDHSWFIAFAPSDKPTIALAVIVENGGFGAQAA
APIARKVLDFYLLGKMPADPIDKTASGASAIAPAGDVVRD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaggttgttctcaatcagaaaggggaacgctttgcgtttcagattcgcctg
attgtcgctgttttatttattttgaccatgtttggcgttttattaggacgttttgtttgg
ctacaagtggctgagcacaatcgctacttgaccttggccgaacaaaaccgcatttcattg
gtaccgattccgccatcccgcggcattatccgagaccgcaatggcgtggttttggcgcat
aacttttccgcttacaccctcgaaataaccccatccaaagtcgccgatttagaagacaca
atcgcccgactcaagggcgttgtggatatcacgcagaaagatcgccgccgctttaaaaag
ctgcaagacgaaaccaaagactttgagaccctgccgatacgcacccgcttaagcgacgaa
gaagtcgcccgctttgcatcgcaaagctatctttttccgggtgtcgaactcaaagcacga
ctctttcgccattacccaatgggtgaggtaggcagtcatttgactggctatattggccgc
atcaacgatagagatattaaagatttagaagaaaaagggatctatgccaattatcgtggc
accgactacattggtaaactcggcattgaaagcagctacgaagaacaattacacggtaaa
acaggttttgagaaagtcgagattgattcgggtggccgtgccgttcgcacgctgagtcgt
acaccgcccaaatcagggcaagacctaaccttgtccattgatatccgtctacaagagatg
gttgaaaagcaatttggcaatcgccgtggcgcactggtggccatcgatccgcgaaccggc
ggcattttggccttggtctccaagcccgggtttgaccccaacttattcgtcgatgggatt
gatccagttagctggaatgaactcaacacctcaatcgataagcccttgctgaatcgcgcc
attcgcggtgagtatcctccgggctcaacctataagccctttattgctttgggtgcactt
gaatacaaattacccatcgtgaaccaaaccatttcggaccccggatatttcatgtatggc
ggtcatcgctttaatgattcaaaaaaaggcggctatggctcgatgagctttgaccgctcg
atcgcactatccagcgacacatacttttaccaactggcggtgcaaatgggcatcgacaag
attgctggatttatgtcgacaatggactttggtaataagaccggcgttgatttacctggc
gagcggcctggcattttaccgagcccagaatggaaaaagcagcgcttcaaaaatccagcg
caaaaaaaatggttttctggcgaaacagtgtcgatcgggattggccaaggttataactcg
ttcacacccatgcaaatggcgcatgccacagcgactttggccaatcgtggggtggccttc
aaaccccatgctgtggccacactcaccgaccctagtacaggaaaaatgactttagttgag
cctaagccgaacaagaccatggattggaaaccagaaaatatcgaacggattatccgcggt
atggaaggcgtaatgaccatcggcaccggcgcaaacgtgtttcgaggcgctgaatatgtc
tcggctggcaaaaccggtacggcgcaagtgtatagcttgaaaggggcgaaatataatgcc
aacgcaattaaagagcgtttacgagatcactcgtggtttattgcttttgcgccctccgat
aaaccgacgattgctttagccgttattgttgaaaacggtggttttggtgcacaagcagca
gccccaattgcccgcaaagtattggatttttacctactagggaaaatgccggccgatcca
attgataaaacagcatcgggggcttcggccatcgcaccagcaggggatgtagttcgtgat
tag
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