Deefgea tanakiae: K4H28_16180
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Entry
K4H28_16180 CDS
T08586
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk03030
DNA replication
dtk03410
Base excision repair
dtk03420
Nucleotide excision repair
dtk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K4H28_16180 (polA)
03410 Base excision repair
K4H28_16180 (polA)
03420 Nucleotide excision repair
K4H28_16180 (polA)
03440 Homologous recombination
K4H28_16180 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtk03032
]
K4H28_16180 (polA)
03400 DNA repair and recombination proteins [BR:
dtk03400
]
K4H28_16180 (polA)
Enzymes [BR:
dtk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K4H28_16180 (polA)
DNA replication proteins [BR:
dtk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K4H28_16180 (polA)
DNA repair and recombination proteins [BR:
dtk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K4H28_16180 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K4H28_16180 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QZA77780
UniProt:
A0ABX8Z7N1
LinkDB
All DBs
Position
3468822..3471623
Genome browser
AA seq
933 aa
AA seq
DB search
MATLLLIDGSSYLYRAFHAIRDLSAPDGTPSNAVFGFVNMLKKLRQQTPADYIACVFDAK
GKTFRDDLYEQYKAQRPPMPDELRVQIEPIHQAVAAFGIPILMVSGVEADDVIGTLAREA
SRQGITTIMSTGDKDMAQLVDEFARIENSMTEEVLRRDEVFAKFNVWPEQIVDYLTLVGD
TVDNVPGVPKCGPKTAAKWLAEYQTLDNVIAHADEIKGVVGQNLRDSLAWLPMAKQLVTI
KCDVDLSVELPNGIADLQTTTEDSATLLALFKRFGFKTWTREMESRLASAPAAPAAVGSI
GSSGDLFAESTIDAGIASQSLVENVLVDIPKVKVERHYETINTAAKLSEWLAKINAAELT
AFDTETTSLDAMQAHLVGMSFSVKAGEAAYLPLAHTGPDHPEQLPLDATLALLKPWLESA
THHKVGQNLKYDQHILANYGITLAGISDDTLLMSYVLASHERHNMDDQAARELGETTIKY
EEICGKGAKQIGFAEVDVEIATQYAAEDADITLRLAHTLKPRLTDKLLEVYRDIEMPSRA
VLYTMERNGILLDAALLQRQSHDIGLRLIELENQAYELAGQPFNLASPKQLGEIFFEKLK
LPVVKKTPKGAPSTDEEVLSELAKDYPLPKVLLEHRSLSKLKSTYTDKLPLMVNPKTGRV
HTSFNQTVAVTGRLSSSDPNLQNIPVRTAEGRKIREAFIAAPGCKLVSADYSQIELRIMA
HLSNDAAMLKAFELGHDIHKATAAEVFGVPLEEVTSEQRRYAKSINFGLIYGMGVFGLAA
QLEITREAAKTFIERYFNRFSSVAEYMEQTRQVVREQGFVETVFGRRLWLPEIKSSNAAR
RAGAERAAINGPMQGTAADLIKLAMVAVADWLVAEQLQSKLLLQVHDELILEVPESELEL
VKTKLPEIMAGVAKLNVPLLAEVGVGMNWEEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctgcttttaattgatggatcatcttatttatatcgcgcttttcatgcgatt
cgcgacctttctgcgcccgatggtactccgagcaatgcagtattcggctttgtgaatatg
ctgaaaaaactgcggcagcaaacacctgctgattatatcgcgtgcgtgttcgatgccaaa
ggaaagacttttcgcgatgatttatatgagcaatataaagcgcaacgtccaccgatgccg
gatgaattacgggtgcaaatcgagccaattcatcaagcggtagccgcctttgggattcct
atcttgatggtcagtggcgtggaggccgatgatgtgatcggaacgctcgcgcgcgaggcg
agtcgccaaggcatcacgaccattatgtcgaccggcgacaaagacatggcgcagttggtc
gatgaatttgcgcgcattgaaaacagcatgaccgaagaagtcctgcgccgcgatgaagtg
tttgccaaatttaatgtctggcccgagcaaatcgttgattatttgacgctggttggcgat
accgtcgacaacgtgccgggcgtgcctaaatgtggcccgaaaaccgccgccaaatggttg
gctgaataccaaaccctcgacaacgtcattgcacacgctgatgagatcaaaggcgtggtc
ggccagaatttacgcgatagtttggcttggttgccgatggccaagcaattggtgacgatt
aaatgcgatgtggatctcagtgttgagcttccgaatggcattgcggatctgcaaacgacg
actgaggatagcgcgactttattggcgctgtttaaacgctttggatttaagacgtggacg
cgagaaatggaaagccgccttgcgtcagcgccagctgcaccagccgctgtgggcagtatt
ggtagcagtggcgatttatttgctgaatccactattgatgcgggtattgcttcgcagtca
ttggttgaaaatgtcttggttgatatacctaaggttaaagtagagcgtcactacgaaacc
atcaacaccgctgccaaactcagcgaatggctcgctaaaattaacgccgccgaactgacc
gcattcgataccgaaacgacgagtctggacgcgatgcaagcgcatttggttgggatgtcg
ttttcagttaaagcgggcgaagcggcctatttaccgctcgcgcacaccggccctgaccat
cctgagcagttgccgttggacgccactttggcgttactcaaaccgtggctagaatcggca
acgcaccataaagtcggccaaaacttaaagtacgatcaacacattttggccaattatggc
atcacgttggccggaattagcgacgatacgctgctgatgtcgtatgtgctcgccagccac
gaacgccacaatatggacgaccaagccgcgcgcgaattgggcgaaacgacgatcaaatac
gaagaaatctgcggcaaaggcgctaagcaaattggctttgctgaagtcgatgtagagatt
gccacgcagtatgcggctgaagacgctgatattactttgcgtttggcgcataccctcaaa
ccgcgcctcactgacaaattgctcgaagtctaccgcgacatcgaaatgccatcgcgcgcc
gtgctgtacacgatggagcgcaacggcattttgctcgacgctgcgctgctgcaacggcaa
agccacgatattggcctgcgcttgattgaattggaaaaccaagcgtatgagctggctggc
caaccgtttaatttggcttctcccaagcaattgggcgagattttctttgaaaaactcaaa
ctgccggtggtcaaaaaaaccccgaaaggcgcgccatcgactgacgaagaagttttgagc
gaattggccaaagattatccgctgcccaaagtgctgctcgaacaccgcagcctttctaaa
ctcaagtcgacttacaccgacaaattgccgctgatggtcaatccaaaaaccggccgcgta
cacaccagctttaaccaaaccgtcgccgtcacaggacgcttgagttcatctgatcctaat
ctgcaaaacatccccgttcgcaccgctgaagggcgtaaaattcgcgaggcatttatcgct
gcgccaggctgcaagctggtttcagccgattactcccagattgaattgcgcatcatggcg
catttatccaatgatgccgcgatgctcaaagcctttgaactcggccacgacattcataaa
gccaccgccgccgaggtgtttggtgtaccgctggaagaagtgaccagcgagcaacgccgc
tacgccaagtcgattaactttggcctgatttacggcatgggcgtgtttggcttagccgcg
caactcgaaatcacgcgcgaagcggcgaaaacctttatcgagcgctatttcaatcgcttt
tctagcgttgctgagtatatggagcaaacgcggcaagtggtgcgcgaacaaggttttgtc
gaaacggtgtttggccgtcgcttgtggctacccgaaatcaaatcgagcaacgccgcccgc
cgcgcaggtgctgaacgcgccgccatcaacggcccaatgcaaggtaccgccgccgatttg
attaaattggcgatggtcgccgtcgctgattggttggttgcggaacagttgcaaagtaaa
ttactgctgcaagtacacgatgaattgattttggaagtgccggaaagcgaattggaatta
gtgaaaaccaaattgccggagattatggcaggggtggcgaaattgaatgtaccgctattg
gcggaagtgggtgtggggatgaattgggaagaggcgcattga
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