Deefgea tanakiae: K4H28_16325
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Entry
K4H28_16325 CDS
T08586
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dtk
Deefgea tanakiae
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtk03021
]
K4H28_16325 (rpoH)
Transcription machinery [BR:
dtk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K4H28_16325 (rpoH)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QZA77809
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Position
3502608..3503465
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AA seq
285 aa
AA seq
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MSNAMTLSTLSVGDSIERYIQRVNAVPMLSPQEEHDLATRHQENGDVEAARQLVMSHLRV
VVSIARGYSGYGLPQADLIQEGNIGLMKAVKRFEATRGVRLYSFAVHWIKAEIHEYILRN
WRLVRIATTKAQRKLFFNLRSMKTSFAALTHTQAKEIADDLGVKPEEVLEMETRMTGQDV
SLVADDGDDDGYAPIDWLADSHNEPTAAIARASTDRLQSTGIVEALDGLDERSRRIIEAR
WLTDEGESLTLHDLAAEFQVSAERIRQIETKALQKMKQVLLPATV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgcgatgacactttcaacactatcggttggcgatagtattgagcgctatatt
cagcgtgttaacgccgttcctatgctttcgccgcaagaagaacacgatttggctacgcgc
catcaagaaaatggtgacgtggaagctgcacgccagttggtgatgtcccacttgcgcgtc
gtggtttcgattgcgcgtggttatagtggctacggcttaccgcaggcggatttgattcaa
gaaggtaatattggcctgatgaaggcggtgaaacgttttgaagcgacgcgtggcgtgcgc
ttatactcattcgccgtgcattggattaaagctgaaattcacgaatatattttgcgcaat
tggcgcttggtgcggattgcaacgaccaaagcacagcgtaaattgttttttaatctgcgc
tcaatgaaaaccagctttgccgctttaacgcacacacaggccaaagagatcgccgatgat
ttgggtgtgaagcctgaagaagttctcgaaatggaaacccgaatgacggggcaagacgtt
tctttggttgctgatgatggtgatgatgatggctacgcgccaattgattggcttgctgat
agtcataatgaacccactgcagctattgcgcgcgctagtacggatcgtttgcaatctacg
gggattgttgaggcgttggatggacttgatgaacgaagccgtcggattatcgaagcccgt
tggctgactgatgaaggggaatctttgactttgcatgatttggcggcggagtttcaggtt
tctgcagagcgtattcgccagattgaaactaaagcactacagaagatgaaacaagtgctg
ctgcctgctacggtttag
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