Deefgea tanakiae: K4H28_16370
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Entry
K4H28_16370 CDS
T08586
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk00470
D-Amino acid metabolism
dtk00550
Peptidoglycan biosynthesis
dtk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K4H28_16370 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K4H28_16370 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dtk01011
]
K4H28_16370 (murD)
Enzymes [BR:
dtk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
K4H28_16370 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dtk01011
]
Precursor biosynthesis
Amino acid ligase
K4H28_16370 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
XdhC_C
DAO
KR
AdoHcyase_NAD
2-Hacid_dh_C
Shikimate_DH
Pyr_redox
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
QZA77816
LinkDB
All DBs
Position
3511873..3513270
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AA seq
465 aa
AA seq
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MELTAKHCIVVGLGDTGLATARWLVAKGARVTVADSRSTPPNLANLQAELPGVALRLGSF
NVDTFADADMLITSPGVPLATPEIAVAIAHGVPVLGDIELLAQALVGKPSQVIAITGSNG
KSTVTTMVAQMCEAAGKTTVMAGNIGVPVLAALAEWEARGEWPDIWVLELSSFQLETTRS
LAPVAATVLNVSEDHLDRYAGMKEYAATKASIFAGVGMQVLNREDGWCRGMARQAREVIW
FGADTPRNGSEYGLLELDGDFSLRCGDIELMKASQLPVAGLHNAVNALASIALCRAAGLP
IEPLIRALKNFKGLPHRVEFVAEINGVAYYDDSKGTNVGATEAALKGMTRPVVLIAGGDG
KGQDFSPLLEACEQICRAVLLIGRDAPALAEVLNEATSAYLPDDDDNYLPVMMVPSLEMA
VSVASNFAETGDVVLLSPACASLDMFKNYHHRAEVFIAAVKGLEH
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaactcactgcaaaacattgcatcgtggttggcttgggtgatacgggcttggccact
gcgcgttggttggtcgctaaaggggcgcgtgtaacggtggctgatagtcgcagcacacca
cccaatttagctaatttacaggctgagttgccaggtgttgcgttgcgacttggttctttc
aatgtcgatacattcgccgatgccgacatgctcatcaccagccctggtgtgccattggca
acaccagaaatcgccgttgctatagcgcatggcgtacctgttttgggtgatattgagtta
ttggcgcaagcattagtgggtaagccgagccaagtgattgccattactggttctaatggc
aaatcgaccgtgacaacgatggtggcgcaaatgtgcgaggccgccggaaaaacaaccgtg
atggccggcaatatcggcgtccccgtcttggccgcattggctgagtgggaagcgcgtggt
gagtggcctgatatttgggtgctcgaactatcaagttttcaattggagacaacgcgttcc
ttagctcccgtcgcggcgacggtgctcaatgtttctgaagatcatttagatcgttacgct
ggaatgaaagagtatgcagcgaccaaagccagtatttttgctggtgtaggcatgcaggtg
ctgaatcgcgaagatggctggtgccggggtatggctcgccaagcaagagaagttatatgg
tttggtgcggatacgccacgtaatggttctgaatatggattgcttgaattagacggtgat
tttagtctgcgttgcggcgatatcgagttgatgaaagcttctcaattgccggttgcgggc
ttgcataatgcggtgaatgccttggcttcaattgccttgtgccgcgcagcgggtttgcca
atcgagccgctcattagagcgctgaaaaacttcaaaggtttgccgcatcgggttgagttt
gtcgctgaaattaatggcgtggcttattacgacgactcaaaaggcaccaatgtaggcgca
actgaagcggcactcaaaggcatgactcgtcccgtggtactgattgcaggtggtgatggt
aaagggcaagacttttctcctttgcttgaggcgtgcgagcaaatttgtcgtgcagtgttg
ctgattgggcgcgatgcacctgctttggccgaagtgctcaatgaagcgacttcagcatac
ttgccagatgatgatgacaattacttgccggtgatgatggtgccgtcactagagatggcg
gtatcggtggcgagcaattttgcagaaacgggtgatgtggtattgctctcgcccgcctgt
gccagcttggacatgtttaaaaattatcaccatcgtgcagaagtgtttattgcagcggtc
aaaggtttggagcattaa
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