Dyella telluris: H8F01_04905
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Entry
H8F01_04905 CDS
T07969
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dtl
Dyella telluris
Pathway
dtl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dtl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H8F01_04905 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtl03021
]
H8F01_04905 (rpoC)
03400 DNA repair and recombination proteins [BR:
dtl03400
]
H8F01_04905 (rpoC)
Enzymes [BR:
dtl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H8F01_04905 (rpoC)
Transcription machinery [BR:
dtl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H8F01_04905 (rpoC)
DNA repair and recombination proteins [BR:
dtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H8F01_04905 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl
RnfC_N
gerPA
Motif
Other DBs
NCBI-ProteinID:
QNK02487
UniProt:
A0A7G8Q6S9
LinkDB
All DBs
Position
complement(1050529..1054743)
Genome browser
AA seq
1404 aa
AA seq
DB search
MKDLLNLFNQQRTAPDFDAIKIALASPELIRSWSYGEVKKPETINYRTFKPERDGLFCAA
IFGPVKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIELASPTAHIWFLKSL
PSRIGLMLDMTLRDIERILYFEAFVVIDPGLTALERGQLLSEDQYLEAVEEHGDEFDARM
GAEAVYELLKSLDLPGEVVRLKEEIASTNSETKLKRLTKRVKLIEAFLESGNRPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFAKLQARGEATTIKAAKKLVEREEGQVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEA
RALMMATNNILSPANGEPIIVPTQDVVLGLYYMTRELVNAKGNGMVFSGIGEVRRAYDNR
AVQLHAKVKVRINQVQIDEDGNRTESTQIVDTTVGRALLLEIMPEGLPFALANTELTKKN
ISRLINQCYRRLGLKDTVIFGDQLMYTGFRFATRAGISIGIDDMIIPDQKKPILEEAEKE
VVEIQEQYQSGLVTAGERYNKVVDIWSRTNELVAKAMIDGIGTEKVTDAEGKTVNQKSMN
SLYIMADSGARGSVAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITSFDCGTDEGVTMQPIVEGGDVVEPLRDRVL
GRVALEDVYGPGEDNEPIVTRDTLLDEALVEKLDKAGVQSIKVRSPITCSADHGVCALCY
GRDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTVKTTGTLK
FNNLKTVQHSQGHLVAVSRSGEVSVIDANGRERERYKVPYGATITVKDGDPVKAGQAVAN
WDPHTHPIVSEVAGTVRFIDFIDGVTVQSQTDDLTGLESAVVTDPKRRGTAAKDLRPIVR
LEDAKGRELKLPGTDVPAQYMLPAGAIVSIQNGANVGVGDVVARIPQETSKTRDITGGLP
RVADLFEARKPKEPAILAERSGVISFGKDTKGKQRLIIKDVDGNEHEELIPKWRQVIVFE
GEHVEKGETVVDGEPSPHDILRLLGVEPLASYLVKEIQDVYRLQGVKINDKHIEAIIRQM
LRKVEITDPGESHYLRGEQVERVRINGENERAVKRGERPAEYQSVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHASRHRQGGLTASEL
ETLSGSASSASFAEATTGSDIGVE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttgctcaatctgttcaaccagcagcgcacggcgcctgacttcgatgcgatc
aagatcgctctggcttcgccggagctgatccgctcgtggtcgtacggcgaagtgaagaag
ccggaaacgatcaactaccgcaccttcaagcccgagcgtgacggcctgttctgcgccgcc
atcttcggcccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgtggtgtgcgaaaagtgcggcacggaagtgacgctggccaaggtgcgccgcgag
cgcatgggccacatcgagctggcctcgccgaccgcgcacatctggttcctcaagtcgttg
ccctcgcgcatcggcctgatgctggacatgaccctgcgcgacatcgagcgcatcctgtac
ttcgaagccttcgtggtgatcgatccaggtctgaccgcgctcgagcgcggccagctgctc
agcgaagaccagtacctggaagccgtggaagagcacggtgacgagttcgacgcccgcatg
ggtgccgaggccgtctacgagctgctcaagtccctggatcttccgggcgaagtcgtgcgc
ctgaaggaagaaatcgcttccaccaactccgagaccaagctcaagcgcctcaccaagcgc
gtgaagctgatcgaggcgttcctggagtcgggcaaccgtccggaatggatggtgctgacc
gtgctgccggtgctgccgccggacctgcgtccgctggttccgctggacggcggccgtttc
gccacgtccgacttgaatgacctgtatcgccgcgtcatcaaccgcaacaaccgcctgcgt
cgcctgctcgaactcaatgcgcccgacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaatcggtcgatgcgctgctcgacaacggccgccgcggccgtgccatcaccggcacgaac
aagcgcgcgctgaagtcgctggccgacatgatcaagggcaagcagggtcgcttccgtcag
aacctgctcggcaagcgcgtggactactccggtcgctcggtgatcgtggtgggtccgacc
ctgcgcctgcaccagtgcggtctgccgaagaagatggcacttgagctgttcaagcccttc
atcttcgccaagctgcaggctcgcggcgaagccaccaccatcaaggccgccaagaagctc
gtcgagcgcgaagaaggccaggtgtgggacatcctcgaagaggtgatccgcgaacatccg
gtcatgctcaaccgtgcgcccacgctgcaccgtctgggcatccaggcgttcgagccgaag
ctgatcgaaggcaaggccatccagctgcacccgctcgtgtgtacggcgttcaacgccgac
ttcgacggtgaccagatggccgtgcacgtgccgctctccatcgaggcgcagctcgaagcg
cgcgccctgatgatggcgaccaacaacatcctgtcgcccgccaacggcgagccgatcatc
gtgccgacccaggacgtggtgctgggcctgtactacatgacccgcgagctggtgaacgcg
aagggcaacggcatggtgttctcgggcatcggcgaagtccgccgcgcctacgacaaccgc
gccgtgcagctgcacgccaaggtcaaggtccgcatcaaccaggtgcagatcgacgaagac
ggcaaccgcaccgagagcacccagatcgtcgacacgaccgtgggtcgcgcgctgctgctc
gaaatcatgccggaaggcctgccgttcgcgctggccaacaccgagctgaccaagaagaac
atctcgcgcctgatcaaccagtgctaccgccgcctgggcctgaaggacaccgtgatcttc
ggcgaccagctgatgtacaccggtttccgcttcgcgacgcgtgccggtatctccatcggc
atcgacgacatgatcatcccggatcagaagaagccgatcctggaagaggctgagaaggaa
gtcgtcgagatccaggagcagtaccagtcgggtcttgtgaccgccggcgagcgttacaac
aaggtcgtcgacatctggtcgcgcaccaacgaactcgtcgccaaggcgatgatcgacggt
atcggtaccgaaaaggtgaccgatgccgaaggcaagacggtcaaccagaagtccatgaac
tcgctgtacatcatggccgactccggcgcccgtggttcggtggctcagattcgtcagctg
gccggtatgcgcggcctgatggctcgcccggacggctcgatcatcgagacgcccatcaag
gcgaacttccgcgaaggcctgaacgttctgcagtacttcaactccacccacggtgcccgt
aagggcctggcggatacggcgctgaagacggcgaactccggttacctgacgcgtcgtctc
gtggacgtggcgcaggacgtggtgatcacctcgttcgactgcggtacggacgaaggcgtc
accatgcagccgatcgtggaaggcggcgacgtggtcgagccgctgcgcgaccgcgtgctc
ggtcgcgtggcgctggaagacgtctacggcccgggcgaagacaacgagccgatcgtcacc
cgcgacaccctgctggacgaagccctggtcgagaagctcgacaaggccggcgtgcagtcg
atcaaggtgcgctcgcccatcacgtgctccgccgatcacggcgtgtgcgcactgtgctac
ggccgcgatctggcccgtggccacctggtgaacatgggtgaagcggtcggcgtcgtcgct
gcgcagtccatcggtgagccgggtacccagctgaccatgcgtacgttccatatcggtggt
gcggcatcccgtgctgctgccgtggacaacgtgacggtgaagaccaccggcacgctgaag
ttcaacaacctcaagaccgtgcagcactcgcagggccacctggtggccgtgtcgcgttcg
ggcgaagtcagcgtcatcgacgccaacggccgcgagcgtgagcgctacaaggtgccttac
ggcgcgacgattaccgtcaaagatggtgatccggtcaaggccggccaggccgtggccaac
tgggatccgcatacccacccgatcgtgtcggaagtggccggtaccgtgcgcttcatcgac
ttcatcgatggcgtcaccgtgcagagccagaccgacgacctgacgggtctggaatcggcg
gtggtgaccgatccgaagcgccgtggtacggccgccaaggacctgcgcccgatcgtgcgc
ctggaagatgccaagggtcgcgagctgaagctgccgggcaccgacgtgccggcgcagtac
atgctcccggccggcgccatcgtgtccatccagaacggtgccaatgtgggcgtgggtgac
gtggttgcccgtatcccgcaggaaacctccaagacccgcgacatcacgggtggtctgccc
cgcgtggccgacttgttcgaagcccgcaagccgaaggaaccggcgattctcgccgagcgt
tcgggtgtcatcagcttcggcaaggacaccaagggcaagcagcgcctgatcatcaaggac
gtggacggcaacgagcacgaagagctgattcccaagtggcgtcaggtcatcgtgttcgaa
ggcgaacacgtggagaagggcgaaaccgtggtggacggcgagcccagcccgcacgacatc
ctgcgcctgctgggtgtcgagccgctggcctcgtacctggtcaaggaaatccaggacgtc
taccgtctgcagggcgtgaagatcaacgacaagcacatcgaggcgatcattcgccagatg
ctgcgcaaggtggaaatcaccgatccgggtgagagccactacctgcgcggcgagcaggtc
gaacgcgtccgcatcaatggcgagaacgagcgtgccgtcaagcgcggcgagcgtccggcg
gagtatcagtcggtgctgctcggtatcaccaaggcatcgctggccacggaatccttcatc
tcggcagcctccttccaggagaccacccgagtcctgacggaagctgcggtccgcggcacg
cgcgacaccttgcgtggcctgaaggaaaatgttattgtcggccgtcttattccggcaggt
acgggtctggcgtatcacgcatcgcgtcatcgccagggtggtcttaccgcctcggagctc
gaaactctctccggctccgcttcgtcggcttccttcgcagaagccaccaccggtagcgac
attggtgtggagtaa
DBGET
integrated database retrieval system
