Dyella telluris: H8F01_09555
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Entry
H8F01_09555 CDS
T07969
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dtl
Dyella telluris
Pathway
dtl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dtl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H8F01_09555 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtl03021
]
H8F01_09555 (rpoD)
Transcription machinery [BR:
dtl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H8F01_09555 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SelB_WH_2nd_bact
Motif
Other DBs
NCBI-ProteinID:
QNK03323
UniProt:
A0A7G8Q965
LinkDB
All DBs
Position
2112350..2114209
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AA seq
619 aa
AA seq
DB search
MNSKAPEQQSEIKALISKGLEQGYLTYAEINDHLPDDIVDPEQIEDIMAVLKGVGIEVHD
AAPDSDPLSDNAPGASTDDEAAAEEAVALLSAVDSEVGRTTDPVRMYMREMGTVELLTRE
GEIAIAKRIEEGLGQVQTALASFPLTIELLLEEYDQHLDGKRRLSEILAGFADLEEAADA
AQAALADAEVEDSDAEGDEEEGEEGGEEEESGPSGPDPEEVKRRMELLRDYYGKFQKAAP
KATDISDKKVTKLRDQMAEEFLKLKLPSALIDSFVRKLREVVNDIRHHERVLMDIFVKHV
KMPKAEFLKAFPSNEGNLEWANELGRKRQKWSPNIKPYKEAIDAEQDKLGAIERKLFLPL
TDIKEINRTMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFG
REPTPEELAKEMDMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTNASSPIESA
TETGLMETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKAL
RKLRHPSRSEQLRSFLDID
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcaaagctcctgagcaacagtctgaaatcaaggcgctcatctccaagggtctg
gagcagggctacctgacttacgccgagatcaacgaccacctgcccgacgacatcgtcgat
ccggagcagatcgaagacatcatggcggtgctcaagggcgtcggcatcgaggtgcatgac
gccgcgccggattccgatccgctgtcggacaacgccccgggcgcgtccaccgacgatgaa
gctgccgccgaagaagccgtggcgctgctgtcggccgtcgactccgaagtgggccgcacc
accgaccccgtccgcatgtacatgcgtgagatgggcacggtcgagctgctgacccgcgaa
ggcgaaatcgccatcgccaagcgcatcgaggaaggcctgggccaggtgcagaccgcgctc
gcctccttcccgctgaccatcgagctgctgctggaggaatacgaccagcacctggacggc
aagcgccgcctgagcgaaatcctggccggcttcgccgacctggaagaagccgccgacgca
gcccaggctgccctggctgacgccgaagtcgaagactccgacgccgaaggcgacgaagaa
gaaggcgaagaaggcggcgaggaagaagagtccggcccgtccggtccggacccggaagag
gtcaagcgccgcatggaactgctgcgcgactactacggcaagttccagaaggcggccccc
aaggccaccgacatcagcgacaagaaggtcaccaagctgcgcgaccagatggctgaggag
ttcctcaagctcaagctgccgtccgcgctgatcgacagcttcgtgcgcaagctgcgcgaa
gtggtgaacgacatccgtcaccacgagcgcgtgctgatggacatcttcgtcaagcacgtg
aagatgcccaaggccgagttcctcaaggcgttccccagcaacgagggcaacctcgagtgg
gcgaacgagctgggccgcaagcgccagaagtggtcgccgaacatcaagccgtacaaggaa
gcgatcgatgccgagcaggacaagctcggtgccatcgagcgcaagctgttcctgccgctg
accgacatcaaggaaatcaaccgcaccatgtcgatcggcgaggccaaggcccgccgcgcg
aagaaggaaatggtcgaggccaacctgcgcctggtcatctccatcgccaagaagtacacc
aatcgtggcctgcagttcctggatctcatccaggaaggcaacatcggcctgatgaaggcc
gtggacaagttcgaataccgccgcggctacaagttctccacgtacgccacgtggtggatc
cgccaggccatcacgcgctcgatcgccgaccaggcacgcaccatccgtatcccggtgcac
atgatcgagacgatcaacaagttgaaccgcatttcccgccagatgctgcagcagttcggc
cgtgagccgacgccggaagagttggccaaggaaatggacatgcccgaggacaagatccgc
aaggtgctgaagatcgcgaaggaaccgatctcgatggaaacccccatcggtgacgacgaa
gattcgcatcttggcgacttcatcgaggacaccaacgcgtcctcgccgatcgagtcggcc
accgaaacgggcctgatggaaaccgtgcgcgacgtgctcgccggcctcaccccgagggaa
gcgaaggtgctgcgcatgcgcttcggcatcgacatgaacaccgaccacacgctggaagaa
gtgggcaagcagttcgacgtgacgcgcgagcgcatccgtcagatcgaggccaaggcgctg
cgcaagctgcgtcatccgagccgctcggagcagctgcgctcgttcctcgatatcgattaa
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