Dyella telluris: H8F01_14240
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Entry
H8F01_14240 CDS
T07969
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
dtl
Dyella telluris
Pathway
dtl02020
Two-component system
dtl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dtl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H8F01_14240
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H8F01_14240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtl03021
]
H8F01_14240
Transcription machinery [BR:
dtl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H8F01_14240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_31
HTH_IclR
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QNK00268
UniProt:
A0A7G8Q0G0
LinkDB
All DBs
Position
complement(3254439..3255908)
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AA seq
489 aa
AA seq
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MKPGLQFRLNQQLTLTPQLQQAIRLLQLSQLELEAELRQIAESNPLLEFSEDNPDNLDSD
EREPLESIPASSSSSSSSDTVDDAEAPEWGEADSDGGSDDPVDFSNGSGAASRSSNPDED
GFEPQNAAAETLQEHLLWQLNLTHMSVRDRTIAAVLIDALNPDGYLTESMESLIAALPAD
LKATTAEVEYVRHTLQRFDPTGVASVDLRDCLSVQLQQFDPDTPHRDLALRIVDTELELL
ARNDIARLARKLRANEDDTAAAAVLIRSLDPRPGAALDVTPVEYVAPDVYARKDLGRWRV
SLNPDCQPRLGLNQHYCGLIAQARGTDASWMRGQLQEARWLIKSLESRAETLLKVAEAIV
RRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYIHTPRGTFELKHFFSSGVS
TEDGGSASATAIQAMLRKLVDAEDPRKPLSDQAIAEELHRKGIQVARRTVAKYREAMRIP
SSSERQRAG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccggactgcagtttcgcctcaatcagcagctcacgctgaccccacagctgcaa
caggccattcgcctcttgcagctgtcacagcttgagctggaggcggaacttcgccagata
gccgaaagcaaccccttgctcgagttctccgaggacaacccggacaacctcgacagtgac
gagcgcgaaccgctggaatccattcccgcgagctcgtccagctccagcagcagcgacacc
gtggacgatgccgaggcccccgaatggggcgaggccgactccgacggcggcagcgacgac
ccggtggacttctccaacggcagcggcgccgcctcgcgcagcagcaacccggacgaagac
ggcttcgaaccgcagaacgccgcggcggaaaccctgcaggaacacctgctctggcagctc
aacctgacgcacatgagcgtacgcgaccgcaccatcgcggcggtgctcatcgatgcgctc
aatccggacggctaccttaccgagagcatggagtcgctcatcgcggccctgccggccgac
ctgaaggcgaccacggcggaagtggaatacgtgcggcacacgctgcaacgtttcgatcct
accggtgtggccagcgtggacctgcgcgactgcctgagcgtgcagctgcaacagttcgat
ccggatacgccgcaccgcgatctcgccctgcgcatcgtggacaccgaactggaactgctg
gcacgcaacgacatcgcgcgcctggcccgcaagctgcgcgcgaacgaagacgacaccgcc
gcggccgccgtgctgatccgcagcctcgatccgcgccccggcgccgcgctggacgtcacg
cccgtggaatacgtggcccccgacgtctacgcgcgcaaggacctcggccgctggcgcgtc
agcctgaacccggactgccagccacggctcggactcaaccagcattactgcggcctcatt
gcccaggcacgcggcaccgatgccagctggatgcgtggtcagctgcaggaagcgcgctgg
ctcatcaagagcctggaatcgcgcgcggaaaccctgctcaaggtggccgaggccatcgtg
cgccggcaaagcgccttcctcgactacggccccgaagccatgcacccgctggtgctgcgc
gaagtggccgaggaagtgggcatgcacgaatcaaccatttcacgtgtaactacccgcaag
tacatccacacgccgcggggcacgttcgaactcaagcacttcttttccagcggcgtatcc
accgaagacggtggcagcgcgtcggccaccgccatccaggccatgctgcgcaagctggtc
gatgccgaggatccgcgcaagccgctgtccgaccaggccatcgcggaggaactgcaccgc
aagggcattcaggttgcccgtcgcaccgtggccaaataccgcgaggccatgcgcattccc
agctccagcgaacgtcagcgcgccggctga
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