Dietzia timorensis: BJL86_1055
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Entry
BJL86_1055 CDS
T04608
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dtm
Dietzia timorensis
Pathway
dtm03420
Nucleotide excision repair
dtm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJL86_1055
03430 Mismatch repair
BJL86_1055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtm03400
]
BJL86_1055
Enzymes [BR:
dtm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJL86_1055
DNA repair and recombination proteins [BR:
dtm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJL86_1055
MMR (mismatch excision repair)
Other MMR factors
BJL86_1055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ANI91848
UniProt:
A0A173LK03
LinkDB
All DBs
Position
1136316..1139867
Genome browser
AA seq
1183 aa
AA seq
DB search
MLGGEHVPDPEHRKAGRTLSDTAKKPLEELTPGDIARAIGGKDPTKAQSKVIDGPPEPTL
VVAGAGAGKTETMAARVVYLVATRKARPGQILGLTFTRKAAQQLSRRVQMRLDEFARSHD
FVSRGDEVSDIAEAIRTEQPRISTYDSYAGDVLSSHGLLIPVEPDATVINETDLYILVHS
IVSEWDRPFPWSVGTVVDRVISLAEQISGHLITTDVVREDEDLLSQAVESLETKAAKKDL
QTAAAAQEDRLALLDVVDAVHDRLRREGKLTFGMRMSYAAQLAERFPEVVDAERRLTSVV
LLDEYQDTGQAQRVMLASLFGGGERKPLAVTSVGDPMQSIYGWRGASASNLDSFLTDFPR
AEGPALQRNLSTSWRNPPEVLTLANSVTAQLRNKNKDSGATVPVLEPKEGSGRGDVRLGV
FATVDDEREWIASRMADKYRSYEFDHGKPPSAAVLVRRNADAEPLARALRAEGLEVEVLS
SGGLLDVPEISDVLALMGVAANPGDDEAAMRLLAGDRFRLGAADLAALHRRAQEISYRPD
GTGEDAAPGIDKLRADFASLAELENIDNAGLADAAHNPGARGSFTPEGRAALTEFDTIVS
AVRDRLDQGPAHVLTVAENALGLDVEVRVRAKLGKGEGRQQLDTLARRAADFASNPDASV
QAFLDYLDVARGVERGLAQEIVPQDGRVQILTVHSAKGLEWNIVAVPHVIKGRFPKDKAP
SNWVRNCWEIPSHLRGDRRTEDNPGGVPVVDIAEATNYKELDELLTGHINELKSTVGEED
RRLFYVALTRSMSELLVSAHHWSEGVQKPLGPSLFLQELRDTVLDAPHVATIDEWVTDPG
DENPLENANARGIWPEHDAGGAGDDPASHAAVSGAEREVASSSPVDLGSFSESSIAEVAA
AAGAEFSDPLTAAWLSEALIHIRQARRAASDVIDVEIPARLTATQHVALERDPASFAVNV
MRPMPQKPNQFARRGTTFHAWVEEYFTAATQFLIADDELPGSGDDWEEADQQALREQFLA
SHWAQKTAAAVEVPFAVSIGGQIKVGKMDAVFRDGEDWIVVDWKTGAKPGAKSPDSVSAR
KHRQDVAIQLAIYRIAWARIQEEETGTPVPLDRIRGAFHYIGSGEDVYPETLPDEAELAA
AFERRFEQTIDAEQVQRALGDGDDEVAAAGNPAGGEKSGRTGR
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggcggcgagcatgtgcccgacccagaacaccggaaggcaggtcggacgttgagc
gacactgcgaagaagccgttagaagagctcacgccgggcgatatcgcccgcgccatcggc
ggcaaagacccgacgaaagcgcagtcaaaggtcatcgacgggccgccggagccgacgctg
gtcgtcgcgggtgccggtgcgggcaagaccgagacgatggcggcgcgcgtggtgtacctc
gtcgccacgaggaaagccaggcccggccagatcctcggtctcacgttcacgcggaaggcg
gcgcagcagctgtcccgccgcgtccaaatgcggctcgatgaattcgcgcgcagccacgat
ttcgtctcccgaggcgacgaggtcagcgatatcgccgaagccattcgcaccgagcagccc
cggatctccacctacgattcatacgcgggcgacgtgctctcgagccacggcctcctcatc
cccgtcgagcccgacgcgacggtgatcaacgagacggacctgtacattctcgtgcactcg
atcgtctccgaatgggaccgtccgttcccgtggtcggtggggaccgtcgtcgatcgggtc
atctcgctcgcggagcagatctccgggcacctcatcaccaccgacgtcgtgcgcgaggac
gaggacctgctgtcccaggccgtcgagtcgctggagacgaaggcggcgaagaaggacctg
caaacggctgcggccgcacaagaggaccggcttgctctcctcgatgtcgtcgacgccgta
cacgatcgcctgcgccgcgaagggaagctcaccttcggcatgcgcatgtcctacgccgcg
cagcttgccgagcgtttccccgaagtcgttgacgccgagcgccgcctcacctccgtcgtc
ctgctcgacgagtaccaggacaccgggcaggcgcagcgcgtcatgctcgcgagcctcttc
ggtggcggcgagaggaaaccgctcgcggtgacgtcggtcggcgatcccatgcagtcgatc
tacggctggcgtggtgcctccgcgtccaacctcgacagcttcctcaccgatttcccgcgg
gccgaaggaccggctcttcagcggaacctttcgacgtcgtggcgcaacccgccggaagtg
ctcacgctcgccaacagcgtcaccgcgcagctgcgcaacaagaacaaggacagcggcgcc
acggtcccggtgctcgaacccaaagagggttccgggcgcggcgatgttcgcctcggcgta
ttcgccactgtcgacgacgagcgcgaatggatcgcctcacggatggccgacaagtaccgg
tcgtacgaattcgatcacggcaaacccccgtcggcggcggtactcgtgcgaagaaatgcc
gacgccgaacccctggcgcgcgcgcttcgggcggaggggctcgaggtcgaagtcctatcc
tcgggagggcttctcgacgtgcccgagatctcggacgtcctcgcgctcatgggcgtcgcc
gcgaaccccggcgacgacgaggcagcgatgcggctgttggcgggggaccgcttccggctc
ggcgccgcagacctggcagcgctgcaccgccgcgcgcaggaaatctcctaccggccagac
gggaccggtgaggacgcggcaccgggaatcgataagcttcgcgccgacttcgcctccctt
gccgagctggagaatatcgacaacgccggactcgcggacgcggcccacaacccgggcgcg
cgcggctcgttcaccccggaaggacgcgcggcgctcaccgaattcgacaccatcgtctcg
gccgtgcgcgacaggctcgatcagggcccggcgcacgtgctcaccgtcgccgagaacgcg
ttgggtcttgacgtcgaggtgcgcgtccgcgcgaagctcggcaaaggcgagggtcggcaa
cagctcgacaccctcgcgcgtcgcgccgccgacttcgcgagcaaccccgacgcgtcggtc
caggcgtttctcgactacctcgacgtcgcccgcggagtggagcgaggactcgcgcaagaa
atcgtcccgcaggacgggcgcgtgcagatcctcaccgtccactcggcgaagggcctcgag
tggaacatcgtcgccgttccccacgtgatcaaggggcgattcccgaaggacaaggcaccg
tccaactgggtgcgcaactgctgggagattccctcccacctacgcggggacaggcgaacc
gaggacaaccccggcggggttccggtcgtggatatcgcggaggcgacgaactacaaggaa
ctcgacgagctgctcaccgggcacatcaacgagctcaagtcgacagtcggcgaggaagac
cgccggctgttctacgtggcgttgacgcgaagtatgagtgagttgctcgtctctgcgcac
cattggagcgagggagtgcagaaaccgctcggcccgtcgctgttcctccaagaacttcgg
gacaccgtgctcgacgcaccgcacgtggcgacaatcgacgaatgggtcaccgaccccggc
gacgagaacccgctggagaacgcgaacgccaggggaatatggcccgagcacgacgccggc
ggtgcgggcgacgatccggcctcgcacgccgcggtgtccggtgccgaacgagaggtggcg
tcgtcctcgccggtcgatctcggctcattctccgaatccagcatcgccgaggtcgccgcg
gctgcgggtgcggaattctccgacccgctcaccgccgcctggctgagcgaggcgctgatc
cacatccgccaggcgcggcgcgcggcgtccgacgtcatagatgtggagattccggcgcgg
ctgaccgcgactcagcacgtcgcgctggagcgggatccggcgagtttcgcggtgaacgtg
atgcggccgatgccgcaaaagccgaaccagttcgcgcggcgagggacaacgttccacgcg
tgggtggaggagtacttcaccgcggccacacagtttctcatcgccgacgacgagctcccg
ggcagcggcgatgactgggaggaagccgaccagcaggcgctgcgcgagcagttcctcgcc
tcgcactgggcgcagaagaccgcggccgcggtggaggtgccgttcgccgtgtcgatcggt
gggcagatcaaggtcgggaaaatggatgcggtgttccgggacggcgaggactggatcgtc
gtcgattggaagaccggcgcgaaacctggtgcgaagtccccggattcggtgagcgcccgc
aagcatcgccaggacgttgcgatccagctggcgatctatcgcattgcgtgggcgcggatc
caagaggaagagaccggtacgccggtgccgctcgaccgcatccgtggagcgttccattac
atcggtagcggggaggacgtctatccggagaccctgccggacgaggccgaactcgccgcc
gcgttcgagcgccggttcgagcagaccatcgacgccgaacaggtgcaacgggcgctcggg
gacggggacgacgaagtcgccgccgcgggtaatccggctggcggcgagaaaagcgggcga
accggccggtaa
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