Dietzia timorensis: BJL86_1402
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Entry
BJL86_1402 CDS
T04608
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dtm
Dietzia timorensis
Pathway
dtm03030
DNA replication
dtm03430
Mismatch repair
dtm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJL86_1402
03430 Mismatch repair
BJL86_1402
03440 Homologous recombination
BJL86_1402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtm03032
]
BJL86_1402
03400 DNA repair and recombination proteins [BR:
dtm03400
]
BJL86_1402
Enzymes [BR:
dtm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJL86_1402
DNA replication proteins [BR:
dtm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJL86_1402
DNA repair and recombination proteins [BR:
dtm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJL86_1402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ANI92184
UniProt:
A0A173LKP0
LinkDB
All DBs
Position
1517294..1520842
Genome browser
AA seq
1182 aa
AA seq
DB search
MSGKGFVHLHNHTEFSMLDGMAQIKPLFAEASRLGMPAVGMTDHGNMYGASDFYREAKKT
GIKPIIGIEAYVAPESRTNTARVRWGEDWQKSDDVSGSGAYTHMTLVAENATGLRNLFRL
SSLASYEGQLGKWPRMDEEILAQYAEGIIATSGCPSGEIQTRLRLGHIDKAYEAAEKWQS
IFGKENFYLELMDHGLDLEKRVRQDLVKLGNDLGMPPLVTNDCHYVTRDQSHAHEAMLCI
QTGKTLSDENRFRFGGDGYFLKSAEEIREQWDAEVPGACDNTLAIAERVTSYDEVWEEKD
RMPKFPVPQGETEDTWLAREVHKGLEWRFPDGVPPEYIERADYELDVIKQKGYPGYFLVV
GDLIEHARSIGIHVGPGRGSAAGALVAYALKITNIDPLEHGLLFERFLNPERPSAPDIDI
DFDDRRRGEMIRYASDKWGADKIAQVITFGTIKTKAAIKDAARVNFGQPGYQIADRITKA
LPPPIMAKDIPLSGIMDPQHERYGEASEVRSLIETDPDVKQIYDTARGLEGMVRNAGVHA
CAVIMSSEPLLDCIPMWKRAQDGALITGWDYPSCEAIGLLKMDFLGLRNLTVIGDCLENI
KTNRNIEVDLDTLGLDDQAAYDLLAKGDTLGVFQLDSGGMRELLKRMKPTGFNDIVAALA
LYRPGPMGMGTHWNYADRKNGKQELTPIHPELEEPLREILGETHGLIVYQEQIMAISREL
AGYSAGEADAFRKAMGKKKAEVLAEQFEKFSGGMTERGYSMESVKALWNTIEPFASYAFN
KSHAAGYGLVSYWTAYLKANFPAEYMAALLTSVGDDKDKAALYLSNCRQMGIRVLPPSVN
ESVTNFASVGEDIRFGMGAVRNVGAHVVEAVVAAREEKGAFRDFSDYLNKIDATACTKKV
TESLIKAGAFDSMDLPRKGLYLIHADAVDSVISTKKAAAVGQYDLFADLGGGGDDDSSES
VFSARVPDVEWDIKSKLSLEKEMLGLYVSGHPLDGLEDALAAKTDTAISTVHEGELPDRT
NITIGGIISGVDRRVNKRGESWAIVTIEDFHGSVEVLFFPKSYQLAAMDIAEDAIVVVKA
RINIRDDRISVFGDTLEAPDLVVTGGGAPFAMSLPTRQINAETVVALKQVLGQHPGESVV
HLRLVNGADSTILRLSEHLRVDPSNSLKGDLKALLGEACLAL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgggtaaaggattcgtgcacctgcacaaccacaccgagttttcgatgttggacggg
atggcgcagatcaagcccctgttcgccgaggcctcccgcctcgggatgcccgcggtgggg
atgaccgaccacggcaacatgtacggcgcctcggatttctatcgcgaggcgaagaagacc
ggaatcaagccgatcatcggtatcgaggcctacgtcgcgcccgagtcgcgcacgaataca
gcccgcgtgcgttggggcgaggactggcagaagtcggacgacgtgtccggttccggtgcc
tacacgcacatgacactcgtggccgagaacgccaccggcctgcgcaacctcttccggctc
tcctctctcgcctcctacgagggccagctcggcaagtggccgcgcatggacgaggaaatc
ctggcgcagtacgccgagggcatcatcgccacctcgggctgcccgtcgggcgagattcag
acgcgcctgcgcctcggccacatcgacaaggcatacgaggccgccgagaagtggcagtcc
atcttcggcaaagagaacttctacctcgagctcatggaccacgggctcgacctcgagaag
cgggtacgccaggacctggtcaagctcggcaacgatctcggtatgccgccgctcgtcacg
aacgactgccactacgtcacccgtgaccagtcgcacgcgcacgaggcaatgttgtgcatt
cagacgggcaagacgctgtcggatgagaatcgcttccggttcggcggcgacggctacttc
ctcaagtccgccgaagagatccgcgagcagtgggacgcggaagtcccgggagcctgcgac
aacaccctcgccattgcggagcgcgtcacctcctacgacgaagtgtgggaagaaaaagac
cgcatgccgaagttccccgtgccccagggggagacggaggacacctggctggcccgcgaa
gtccacaaggggcttgaatggcgttttcctgacggcgtacctcccgaatacatcgagcgt
gccgattacgagctcgacgtcatcaagcagaagggttaccccggctacttcctcgtcgtc
ggcgacctcatcgaacatgcgcggtccatcggtatccacgtggggcccggccgtggttcc
gccgcgggcgcgctcgtcgcgtacgcattgaagatcacgaacatcgatccgctcgagcat
ggtctgctcttcgagcgattcctcaatcccgagcgcccgtccgcgcccgatatcgatatc
gacttcgacgaccgccgccgcggcgaaatgatccgctacgcctccgacaagtggggcgcg
gacaagatcgcccaggtcatcaccttcggcacgattaagacgaaggcggcgatcaaggac
gccgcccgcgtcaacttcggccagcccggctatcagatcgccgatcgaatcaccaaggca
ctcccgccgccaattatggcgaaggacattccgctctcgggcatcatggatccccaacac
gagcggtacggcgaggcgtcggaagtgcgttcgctgatcgagacggaccccgacgtcaaa
cagatttatgacacggcccggggcctcgagggcatggtccgtaacgccggcgtccacgcc
tgtgcggtgatcatgtcctcagagccgctgctcgactgcataccgatgtggaagcgcgcc
caggatggcgccctcattacgggctgggactatccgtcgtgtgaggccatcggcttgctc
aagatggacttcctgggtctgcgcaacctcaccgtcatcggtgactgcctggagaacatt
aagaccaaccggaacatcgaggtcgacctcgacaccctgggtctggacgatcaggctgcc
tacgacctcctcgccaagggcgacacgctcggcgtgttccagctcgactccggcggcatg
cgcgagctgctcaagcggatgaagccgacaggcttcaacgacatcgtcgccgctctcgct
ctttatcgcccgggaccgatgggcatggggacgcactggaactacgccgaccgtaagaac
ggcaagcaggagctcaccccgatccacccggagctcgaggagccgctacgggagatcctt
ggcgagacgcacggcctcatcgtctaccaggagcagatcatggccatctcccgtgagctt
gcgggatactcggccggtgaggcggacgcgttccgtaaggccatgggtaagaagaaggcc
gaggtgctcgccgagcagttcgagaagttctccggcggtatgaccgaacgcgggtactcc
atggagtcggtcaaggcgctgtggaacacgatcgagcccttcgcctcgtacgcgttcaac
aagtcccacgccgccggctacgggctggtgtcttactggacggcgtacctcaaggcgaat
ttccctgccgagtacatggcagcgctgctcacctctgtcggcgacgacaaggacaaggca
gccctgtacttgtccaattgccggcagatggggatccgagtccttccgccttcggtcaac
gaatcggtcacgaacttcgcatccgtcggcgaggacatccgcttcggcatgggggctgtc
cgcaacgtcggcgcccacgtcgtcgaagcggtggtggcagcgcgcgaggagaagggcgcg
ttccgcgacttctccgattacctcaacaagatcgacgcgacggcatgtacgaagaaggtc
accgaatccctgatcaaggcaggcgccttcgattcgatggacctgcctcggaagggtttg
tatctcatccacgccgatgccgtggattcggtgatttcgacgaagaaggccgccgccgtc
ggacagtacgacctgttcgccgacctcggtgggggaggtgacgacgattcgtccgaatcg
gtgttctccgcgcgcgtcccggatgtcgagtgggacatcaagtcgaagctgtccctggaa
aaggagatgctcggactctacgtctccggacatccgctcgacggactcgaggacgcgctc
gccgcgaagacggataccgcgatttccaccgtgcacgagggtgagcttcccgaccgcacc
aatatcactatcggcggaatcatctccggcgtggaccgccgcgtgaacaagcgcggcgag
tcctgggcgatcgtgacgatcgaggacttccacggctccgtcgaggtgctgttcttcccg
aagtcctaccagctcgcagcgatggacatcgccgaggacgccatcgtcgtcgtcaaggcg
cgaatcaacattcgcgacgacaggatttcggtcttcggcgatacgctggaagctcctgac
ctggttgttaccggcgggggagcgccatttgcgatgtctctgccgacgcggcagatcaac
gccgagaccgtggtcgcgctcaaacaggtactggggcagcatccgggtgaatcggtggtt
catctgcgcctggtcaacggggcggattccacgattctgcgtttgtccgagcacttgcgt
gtcgatccgtcgaactcactcaagggcgacctgaaagctctgctcggggaggcctgcctg
gccctctga
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integrated database retrieval system
