Dietzia timorensis: BJL86_1992
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Entry
BJL86_1992 CDS
T04608
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dtm
Dietzia timorensis
Pathway
dtm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJL86_1992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtm03021
]
BJL86_1992
03019 Messenger RNA biogenesis [BR:
dtm03019
]
BJL86_1992
Transcription machinery [BR:
dtm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BJL86_1992
Messenger RNA biogenesis [BR:
dtm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJL86_1992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
SAP
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ANI92760
UniProt:
A0A173LQ63
LinkDB
All DBs
Position
complement(2161744..2163732)
Genome browser
AA seq
662 aa
AA seq
DB search
MTSAETSKSTDISTLRLPELKALAQQLGLKSLSGKRKGELVALINSARGNSGPPTSSAPA
AKNNPSDDGGRADSQDGAESGRRSRRVSRGAGAPDQQTLDSAVIGAEQGSAKAQDGTTQR
DDEDRSGDKGGDRDKSRGNRKDRGDRDNGGGGHNDGGDRNNRDNNNRDNGGGNHDGGHND
GDDQQGRGNNRNRNRNRNRNRNNNDRNNGGGNNNGGGNNNRGNDSDDNNGGGNNNGGGNN
NRGNNRDNRDDEGGRGRRGRRRRDRGRNRNDGDSGEIREGDVLQPVAGILDVLDNYAFVR
TSGYLAGQNDVYVSINMVRKNGLRRGDAVVGAVRMPREGENNQRQKFNPLVRVDSINGGT
VEEAKARPDFGKLTPLYPNQRLRLETEKTKLSTRVIDLVMPIGKGQRALIVSPPKAGKTT
ILQNIANAIAHNNPECHLMVVLVDERPEEVTDMQRSVEGEVIASTFDRPPSDHTQVAELA
IERAKRLVEAGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSTALYPPKRFLGAARN
IEFGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRRISERRVFPAVDVGPSGTR
KEELLMSNEEAQIMHKLRRVLSGLDSQQAIDLLMSQLRKTQNNYEFLLQVSKTTPTLPQD
EE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcagcggaaacctctaaatcaaccgatatcagcaccttgcgccttcccgagctc
aaggccctcgcgcagcagctcggcctcaagagcctctcgggtaagcgcaagggcgagctc
gtcgccttgatcaactcggcacgcgggaactccggcccgccgacgtcgtcggctcccgcc
gcaaagaacaacccttccgatgacggcggacgtgccgattcgcaggacggcgccgaaagc
ggccgccgctcgcgcagggtttcgcgcggtgcaggtgcgcccgaccagcaaacgctggac
tccgctgtcataggcgcggagcagggaagcgcgaaggcgcaggacggcacgacgcagcgc
gacgacgaggaccgcagcggcgacaagggcggcgatcgcgacaagagccgcggcaaccgc
aaggatcgcggcgaccgcgacaatggcggcggcggccacaacgacggcggcgaccgcaac
aatcgtgacaacaacaatcgcgacaacggcggcggaaaccacgacggcggccacaacgac
ggcgacgatcagcaggggcgtggcaacaaccgcaaccgcaaccgcaatcgcaaccggaac
cgcaacaataacgaccgcaacaacggcggtggaaataacaacggcggcggtaacaacaac
cgcggcaacgattccgacgacaacaacggcggcggcaacaacaacggcggcggtaacaac
aaccgcggcaacaatcgcgataaccgggacgacgagggcggtcgtggccgccgtggacgt
cgtcgccgcgatcgcggacgcaatcggaacgacggcgactcgggcgagattcgcgaaggc
gatgtgctgcagcccgtcgcgggcattctcgatgtgctcgataattacgcgttcgtgcgc
acctcgggctacctggcggggcagaacgacgtctacgtctccatcaatatggtccgcaag
aacgggctgcgccgcggtgacgcggtcgtcggtgccgtgcgcatgccgcgcgagggggag
aacaatcagcgccagaagttcaacccgctggtgcgcgtcgactccatcaacggcggcacg
gtcgaggaagccaaggcgcgcccggacttcggcaagctcaccccgctctacccgaaccag
cgcctacgcctggagaccgagaagacgaagctctccacgcgtgtgatcgacctggtcatg
ccgatcggcaagggccagcgtgcgctgatcgtgtcgccgcccaaggccggtaagacgacg
atcttgcagaacatcgcgaacgcgatcgcgcacaacaaccccgaatgccacctcatggtc
gtgctcgtcgacgagcgccccgaggaagtcacggatatgcagcgttcggtcgagggcgag
gtaatcgcctcgacgttcgatcgtccgccgtcagaccacacccaggtggccgagctcgcc
atcgaacgggcgaagcgcctggtggaggcagggcaggacgtcgtcgtgctgctcgactcc
atcaccagactcggccgcgcgtacaacaactcctcgccggcgtccggtcgcatcctttcc
ggcggtgtggactcgaccgcgttgtacccgccgaagcggttcctcggtgcggcccgcaat
atcgagttcggcggctctctcacgatcatagccacggcgatggtggagaccggttccgcg
ggcgacaccgtgatcttcgaggagttcaagggcaccggcaatgccgagctcaagctcgac
cgccggatctccgagcgccgcgtgttcccggcggtcgatgtcgggccctcgggcacccgt
aaggaagaattgctcatgagcaacgaagaggcgcagatcatgcacaagctgcgtcgcgtg
ctctcagggctcgactctcagcaggccatcgatctgctcatgagccagctccgcaagact
cagaacaactacgagttcctgctccaggtgtcgaaaaccacgccgacgctgccgcaggac
gaggagtaa
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