Defluviitoga tunisiensis: DTL3_0151
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Entry
DTL3_0151 CDS
T03867
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dtn
Defluviitoga tunisiensis
Pathway
dtn03420
Nucleotide excision repair
dtn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DTL3_0151
03430 Mismatch repair
DTL3_0151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtn03400
]
DTL3_0151
Enzymes [BR:
dtn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DTL3_0151
DNA repair and recombination proteins [BR:
dtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DTL3_0151
MMR (mismatch excision repair)
Other MMR factors
DTL3_0151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_11
ResIII
AAA_30
DEAD
Terminase_6N
DUF5906
Motif
Other DBs
NCBI-ProteinID:
CEP77482
UniProt:
A0A0C7NNH9
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All DBs
Position
I:164927..166906
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AA seq
659 aa
AA seq
DB search
MKKEDYFYIEKEIPSFLKKALDEEQLEAVINSNGRSIIVAGPGSGKTRVITYKIAYLLYL
GLKPENILLVTFTRAAAKQMIERVKNVTNRDMSSMLAGTFHHVCNTILRRYAALLDFKND
YSILDKEDSKDLLRIAKNEYMRESSDKYKFPKEDVIMKVISYTCNTLNSLRETLLDIAPY
LLEFENDIEQIWGIYSQLKKDMNVMDYDDLLVNTLMLFHTHPDILKKVSEQFQYVLVDEF
QDTNKIQIELIKAFSSVHGNLIVVGDDSQSIYSFRGAHFKNIKDFIDKEGTKIFKIQTNY
RSTPEIVNFINNMLPSNSVPKTLKPKRKGYIKPFVIETFDDLEQADAVVQIIKNKLEEGI
NYKDIAILYRSHSLSMVIQQKLDTVGIPYRILSGLRFIETRHIKDVLGFLKVLNNPLDKI
SWIRILKLFPGIGTKTASKIYNEIEKGINSGQSKNIEEILTKTQLIRFTTPFELLKKLYI
NMDKNPSEIIDYIYKDYYEEYSLLTFSDAKSRNMDIERFSEIASRYPSLSSFLEDLTLSE
DIGIMNVEKEEERDTITLTTIHGAKGLEWKVVILISVNPGDLPNGLAIKDKKLDEEERLF
YVAITRAKDELYILKQLSGTSNPFMKNSIYFVNKEYDFIEKIPDDIINRVRVNYKNDIY
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaagattatttttatatagaaaaagaaatcccctccttcttgaaaaaagct
ttagatgaggaacaattagaagcggttataaattctaatggaagatccataatagttgct
ggtcctggttcaggtaaaacaagggtaataacgtacaaaattgcttatttattatactta
ggattaaaacccgaaaatattctactcgtcacttttacacgagccgcagcaaaacaaatg
atagaaagagttaaaaatgttactaacagagatatgagtagcatgctggcagggacattt
caccatgtatgcaatactattctgagaagatacgctgctctacttgattttaaaaatgat
tacagtattttagataaagaagactcaaaagacctgcttagaatagcaaaaaatgaatat
atgagagaatccagcgataaatataaatttcctaaagaagatgtaataatgaaagttatt
agttatacatgtaatactttgaattctcttagagaaactttactagacatagctccttac
ttattagagtttgagaacgatattgaacaaatttggggtatttactctcagttaaaaaaa
gacatgaatgttatggactatgacgatcttttagttaacacactcatgttgtttcatacc
catcctgatattctaaaaaaggtatcagaacagtttcaatatgttttagttgatgaattt
caagatactaataaaattcaaattgaattaataaaagctttttctagtgtccatggaaat
ttaattgttgttggtgatgattcacaaagtatttactcatttagaggagctcatttcaaa
aacataaaagatttcatagataaagaaggtacaaagatatttaaaatacaaacaaactat
agaagtaccccagaaatagttaatttcataaataatatgctaccttcaaattccgttcct
aaaactctaaaaccaaaaagaaaaggatacataaaacctttcgtaatagaaacttttgat
gatttagaacaagctgatgctgttgtacaaattatcaaaaataagttagaagaaggtatc
aactacaaagacatagcaattctttatagatctcactctttatcaatggtaatacagcaa
aaattagacacagtaggtataccatatagaattctgtcggggcttagatttattgaaaca
agacatattaaagatgttttaggatttctaaaagttctaaataatcctttagataagatt
tcatggattagaattttaaagttatttccagggattggtacaaaaactgcttcaaagata
tataatgaaattgaaaaaggaataaattctggacaatcaaaaaatatagaagaaatatta
actaaaacacaacttataagatttacaaccccttttgaactattaaaaaaattgtatatc
aacatggacaaaaatccaagtgaaataattgattatatatataaagactattatgaagaa
tactctttactcacttttagtgatgcaaaatctagaaacatggatattgaaagatttagt
gaaattgctagtcgatatccttctttatcttcttttttagaagatttaaccctaagtgaa
gacattggcattatgaatgttgaaaaagaagaagaacgtgatacaattactttgacaact
attcatggagctaaggggcttgaatggaaggtagtaattctaatatcggtaaatcccgga
gatttaccgaacggattagctattaaagataaaaaattagatgaagaagaaagactattc
tatgttgctattacaagagcaaaagatgaactatatattttaaaacaattatctggaact
tcaaatccatttatgaaaaactctatctactttgtaaataaagaatatgatttcatagaa
aaaataccagatgatattataaatagagtaagagttaactataaaaacgatatttattga
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