Defluviitoga tunisiensis: DTL3_0325
Help
Entry
DTL3_0325 CDS
T03867
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dtn
Defluviitoga tunisiensis
Pathway
dtn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DTL3_0325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtn03019
]
DTL3_0325
03009 Ribosome biogenesis [BR:
dtn03009
]
DTL3_0325
Enzymes [BR:
dtn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DTL3_0325
Messenger RNA biogenesis [BR:
dtn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DTL3_0325
Ribosome biogenesis [BR:
dtn03009
]
Prokaryotic type
rRNA helicases
DTL3_0325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
P-loop_SecA
Helicase_RecD
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
AAA_30
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
CEP77656
UniProt:
A0A0C7NI58
LinkDB
All DBs
Position
I:346979..348571
Genome browser
AA seq
530 aa
AA seq
DB search
MEKFQNMGLSESTLHAISNKGYNEPTAIQEMVIPFLLSGESNVIGQAQTGTGKTAAFGIP
MIEKLKEKAGYVQALVLTPTRELAVQVCEELDSLKGNKKLKVISIYGGVSISEQIRALKK
HVDIVVGTPGRIIDHLNRGTLDISNIEYLIIDEADEMLDMGFIEDVEFIISKTNEKKKVL
MFSATIPARIISLAKKYMGKFEIISTIKDSKEDLTVKKARQIYFKIQEIDKINLLIRLID
LDDDFYALVFTNTKVQSEEVANRLIENGYEAEVLNGDVSQYQRERILNKFKDKKTKILIA
TDVAARGIDIDNLKYVINYSLPQNPENYIHRIGRTARAGNEGTAITFVTPREFRKFLFIK
NSVGSDIKEAKIPNISDIINSKIDRIKGDIVASSSENVEKIYKLLAQRILEESEEDPETI
ISSILKYFLKDTLNTKKYEEIRKVERNTTFKNTRLFVALGNSDNISPKKLAEFIEKETGI
SKKNIRNIQVLEKFSFVSVPFEESQVILETFKRKSKGRKPLVAEAKNQGK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttcaaaatatgggtctttccgaatcgacattacacgcgatttcgaataaa
ggttacaatgaaccaactgccattcaagaaatggtgatcccattcctcttatcgggggaa
agtaatgtaatcggacaggctcaaacaggaacaggcaaaacagcagcatttggtattcct
atgattgaaaaacttaaagagaaggcaggttatgttcaggcacttgtactaacgcctacg
agagaattagcggtgcaagtatgcgaagagctagattctctaaagggaaataaaaaactt
aaagttatttcaatatatgggggagtttcaattagtgaacaaattagagctttaaagaaa
cacgttgatattgtggtgggtaccccaggacgtattattgaccatctcaatcgtggaacc
ttagacattagcaatattgaatatttaattattgatgaagcggacgagatgctagatatg
ggttttatagaagatgttgagtttattatttcaaaaaccaacgaaaagaaaaaagtacta
atgttttcagcgactattccagcaagaattatctcattggcaaaaaaatatatgggaaag
tttgagataatttctacaatcaaagatagcaaggaagatttgactgtaaagaaagcaaga
caaatttattttaaaattcaagaaattgataaaatcaatcttctaattagactcatagat
ttagatgatgatttttatgctcttgttttcaccaatacgaaagttcaatctgaagaagtt
gctaacagattaattgaaaacggatatgaagctgaggttttaaatggtgatgtatcacaa
tatcaaagagaaagaatattaaacaaatttaaggacaaaaaaacgaagatattaattgct
actgatgttgcagcacgaggaattgatatagacaatcttaaatacgtaataaactattca
cttccacaaaatccagaaaactatattcatcgcattggaagaacagcaagggcaggtaat
gagggtactgcaataacttttgttacaccaagagaatttagaaaatttttatttatcaaa
aattctgtaggctcagacattaaagaagccaaaattcctaatatttcagatattatcaat
tctaaaattgatagaattaaaggcgatatagttgcttcttcttctgaaaatgtcgaaaag
atttataaattattggcacaaagaattttagaagaatctgaagaagaccctgaaacaatt
atttctagtatattaaagtattttctaaaagatactttaaatacaaaaaaatacgaagaa
ataagaaaagtggaaagaaataccacttttaaaaacactagattgtttgtagcattagga
aacagcgataatatatctcccaaaaaattggctgaatttattgaaaaagaaacgggtatc
agcaaaaaaaatataagaaatatacaagtgcttgaaaagttttcctttgtttctgttcca
tttgaagaatctcaagtaattttagaaaccttcaaacgtaaatcaaaaggtagaaaacca
cttgttgctgaagccaaaaatcaaggaaaatag
DBGET
integrated database retrieval system
