Defluviitoga tunisiensis: DTL3_0656
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Entry
DTL3_0656 CDS
T03867
Symbol
rpoD5
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dtn
Defluviitoga tunisiensis
Pathway
dtn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dtn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DTL3_0656 (rpoD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtn03021
]
DTL3_0656 (rpoD5)
Transcription machinery [BR:
dtn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DTL3_0656 (rpoD5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
CEP77966
UniProt:
A0A0C7NJ52
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All DBs
Position
I:complement(685083..686405)
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AA seq
440 aa
AA seq
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MLEEKKCCDSNINTSKVKVSEPYLKKETTSRTLTTKSPKEKNGERVDIVKKIKNKALKNN
NTITFEEIEVVITSFNNDEFSLEFLIDFYNKLKQAEISVIDGDELEQYCENLGSEYGSNT
KEDEDNENVLESFYEDFTDEEIDNIFEGFSELEVEMCDNISMQDPIKIYLKEISKSKLLT
PSRERKLAMRAKKGDKRARDELIKCNLRLVISIAKRYTGRGLSFLDLIQEGNIGLMKAVE
KFDWKKGYKFSTYAYWWIRQAITRAIADQGRTVRIPVHLVETINKMNRIVNEYVQENGEA
PNLETLAELMDKPVEKMKEILVSSKNIYSLNAPISNDVDSEGESELLDFVDSDIPTPHEE
GRKMIIREKVEEVIDTLSTKEAMVLKMRFGFIDGKQKTLEEVGEYFNVTRERIRQIESKS
IRKLKHPVRRKMIENILNEY
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagaaaagaaatgttgtgattctaacattaacacatcaaaagtaaaagtatcg
gagccttacctaaagaaagaaactacctctcgaacattgaccactaaatctccaaaggaa
aaaaacggtgaacgagttgatattgtcaaaaagattaaaaataaagccttgaaaaacaac
aacacaataacctttgaagaaatagaagtggtcataacatcttttaacaacgacgaattt
agccttgagttcctcatagatttttacaataagttaaagcaagcagagatatctgtaatt
gatggtgatgaactggagcaatattgcgaaaatttggggtcagaatatggatctaatact
aaagaagatgaggataacgaaaacgtcttagagagtttttacgaagatttcactgacgaa
gaaatagataatatttttgagggcttttctgagttagaagttgaaatgtgtgacaacatt
tcaatgcaagatcctataaaaatctaccttaaagaaataagcaaaagtaaacttctgaca
ccttccagagaaagaaaattagcaatgagggcaaaaaaaggcgataaaagagctagagat
gaattaattaagtgtaatcttaggttagtaattagtatagcaaaaaggtatacaggtaga
ggtctaagctttttggatttaatacaagaaggaaacattggactaatgaaagcagtagaa
aagtttgactggaaaaaagggtataagttttcaacttatgcctattggtggataagacaa
gcaattactagagcaattgcagatcaaggcagaactgtaagaatacctgtacatcttgta
gaaacgattaataaaatgaaccgcattgttaatgaatatgttcaagaaaacggtgaagct
cctaatttggaaactctagcagaattaatggataaacctgttgaaaagatgaaagaaata
ttggtaagctctaaaaatatttattctttaaatgctccgatatcaaatgatgttgatagt
gagggtgaatctgaattattagatttcgttgattctgatatccctacccctcatgaagaa
ggacgtaagatgattattcgtgaaaaggttgaagaagtaattgacacattatcaactaaa
gaagctatggtactaaagatgagattcggttttattgatggtaagcaaaaaacattagag
gaagtcggggaatatttcaacgttactcgagaaagaataaggcagatagaatctaaatct
attagaaagctaaaacatcctgttagaagaaagatgatcgaaaatatacttaatgagtat
taa
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