Desulfobacula toluolica: TOL2_C00020
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Entry
TOL2_C00020 CDS
T02268
Symbol
gyrB
Name
(GenBank) GyrB: DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dto
Desulfobacula toluolica
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dto03032
]
TOL2_C00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
dto03400
]
TOL2_C00020 (gyrB)
Enzymes [BR:
dto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TOL2_C00020 (gyrB)
DNA replication proteins [BR:
dto03032
]
Prokaryotic type
DNA Topoisomerases
TOL2_C00020 (gyrB)
DNA repair and recombination proteins [BR:
dto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TOL2_C00020 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
CCK78172
UniProt:
K0NGR1
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All DBs
Position
1136..3559
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AA seq
807 aa
AA seq
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MDKNKVTKEYSAGSIKVLEGLEAVRKRPSMYIGNVDIEGLHHLVYEVVDNSIDEAMAGHC
DTIFVTIHPDNCVSVEDNGRGIPVAIHETENIPACEVVMTKLHAGGKFDKDSYKVSGGLH
GVGISVVNALSLNLDMEVYKDGKIYHQSYSKGDKKTELVIKGDTVKRGTKITFIPDFEIM
NENEFIYEIISRRMRELAFLNKGIRIIIEDERSAEKDDFHYEGGIVSFVEYLNRSCTALH
DPIHIEGDKKDVQIEVSIQYNDTFKEKLYSYANNIRTIEGGAHVSGFKAALTRTVNSYIS
SGSNNLPKNMQNIKIGGDDMREGLAVIISVKLMEPQFEGQTKTKLGNNEIKGIVESLLNE
KLGQYLEENPNVAKKIIAKAVDAARARDAAKRARELARKKGTLLDSSLPGKLAECQFADP
AERELFLVEGDSAGGSAKQGRDRRFQAILPLKGKILNVEKARFDKILRSDEIKNIITVLG
TGVGREEYDIEKVRYHKVVIMTDADVDGSHIRTLLLTFFYRQMPDLISKGYLYIAQPPLF
RVGSRKSGVYLKNEEEYSNYLVKRIAGQKDMFIYGNKEPLLEEDFYFFLVNLSDYYNAVV
LLKKRDMDTDLLLTLIKNGVKDKFFLEEKQNFISLSEDLTKHGYISGEIEYDPERNIFEM
DIYEKEEKQPVLRVGREILATNDYKRMLKGYEKIKQFDKPPFSISAKQSDAEVKKEYPFD
DIYSLFEFIMSEAKKGINIQRYKGLGEMNPDQLWETTMNPEKRIMLKVNIEDAEKADEIF
TLLMGEEVEPRRNFIQKHALEVSSLDY
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaaataaagtaacaaaagagtatagtgccggcagtataaaagtactggaaggt
cttgaagccgttcgtaaaagaccttccatgtatattggaaatgttgatattgaagggctt
caccacctggtttatgaagtggtggacaacagtattgatgaagccatggcaggacactgc
gatacgatttttgtgaccattcatccggataattgtgtgagtgtggaagataacggtcgc
ggaattcccgttgcaatacatgaaacagaaaatatacctgcctgtgaagtggtcatgacc
aagcttcatgccggaggtaaatttgataaagattcctataaagtatcaggagggttgcac
ggagttggaatttccgttgttaatgcactttccttgaatcttgacatggaagtctataaa
gatggaaaaatttatcatcagtcctactccaaaggtgataagaagaccgaacttgtcatt
aaaggagatacggttaaaaggggaacaaaaattacattcattcctgattttgaaatcatg
aacgagaatgaatttatttacgaaatcatttcccgaagaatgagagaacttgccttttta
aataaaggaatcagaatcattattgaagatgaacggtctgctgaaaaagatgattttcac
tatgaaggtggaattgtctcttttgttgagtatttgaaccggtcctgtactgctttgcat
gatcccatccatatcgaaggtgataaaaaggatgtacagattgaagtgtccattcaatac
aatgatacctttaaggaaaaactctattcttatgccaataatatcaggaccattgaaggt
ggtgcccatgtgtccggttttaaggcagcgttaacccgtactgtaaactcttatatctct
tctggatcaaataatctgcccaaaaatatgcaaaatattaaaatcggcggcgatgatatg
agagaaggtcttgctgttattatttccgtgaaacttatggaaccccagtttgaaggtcag
actaaaacaaagctgggaaataatgaaattaaaggaattgttgaatctcttctcaatgaa
aaactgggtcagtatcttgaggaaaatccaaatgttgcaaaaaaaattattgccaaggcg
gttgatgccgcaagggcaagggatgccgccaaaagagcaagagaacttgccagaaaaaaa
ggaacccttctggattcgtctttgccgggtaaactggctgaatgccagtttgcagatcct
gctgaaagagaattgtttcttgtggagggagattctgcaggcggcagtgccaaacaggga
agagacagacggttccaggcgattcttcctcttaagggaaaaatacttaatgttgaaaag
gccaggtttgataaaatcctgagaagtgatgaaatcaagaacattattacggttttaggc
actggtgtcggcagggaagagtatgacattgaaaaagtcagatatcataaagttgttata
atgacggatgcggatgttgacggatctcatatcagaactctgctgttgacctttttttac
aggcagatgccggatctgatttcaaaagggtatctatatattgcccagccgccgcttttc
agagtgggatcaaggaaaagcggggtatatcttaaaaatgaagaagagtattccaattac
ctggtgaaaagaattgccgggcaaaaagatatgtttatatatggcaacaaggaacctctt
ttagaagaagacttttatttttttctggtcaatttatctgactattataatgcagtcgtt
ttattaaagaaaagagatatggatacagatctcttgcttactctgattaaaaatggtgtg
aaagataaattttttcttgaggaaaagcaaaattttatttctctttcagaagatcttacg
aaacacggatatatctcaggtgaaatagagtatgatccggaaagaaatatctttgaaatg
gatatatatgaaaaagaagaaaaacagcctgttttaagggttggcagagaaattctggct
accaatgattataaaaggatgctgaaaggatatgaaaaaatcaaacagtttgataaacct
cctttttccatatctgctaaacagtcagatgctgaagtaaaaaaagagtacccgtttgat
gatatatacagtctatttgagtttataatgtcagaagcaaaaaaagggattaatattcag
cgatataaaggtctgggcgaaatgaatccggaccaactctgggaaaccactatgaatcct
gaaaaaaggataatgctcaaggtgaatattgaagatgctgaaaaagcagatgagatcttt
actctccttatgggtgaggaagtggaacctcgaagaaattttattcaaaaacatgccctt
gaggtctcgtcactagattattga
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