Desulfobacula toluolica: TOL2_C04400
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Entry
TOL2_C04400 CDS
T02268
Symbol
rho
Name
(GenBank) Rho: transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
dto
Desulfobacula toluolica
Pathway
dto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL2_C04400 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dto03021
]
TOL2_C04400 (rho)
03019 Messenger RNA biogenesis [BR:
dto03019
]
TOL2_C04400 (rho)
Transcription machinery [BR:
dto03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TOL2_C04400 (rho)
Messenger RNA biogenesis [BR:
dto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TOL2_C04400 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
S1CSD-TOTE-2
Spore_III_AA
AAA_24
AAA_25
FtsK_SpoIIIE
AAA
Motif
Other DBs
NCBI-ProteinID:
CCK78609
UniProt:
K0N3B8
LinkDB
All DBs
Position
complement(529239..530306)
Genome browser
AA seq
355 aa
AA seq
DB search
MEPVQGYLEIMDKGFGFLRQIEENFQPKPENTYVPNSLIRKLNLKEGSFIEGFGEQKGPA
NLNLALIRIETINKLPFDEFINTPLLQDQVSINPFERYYLTQDEDDITGKAIDLITPIGM
GQRGLIISPPKSGKTTILRHMANSIVMNHPDAKVFVLLIDERPEEVTDFQRGLKDAHVLY
SSADQQIGQHMRMTRIAMHTAIRCAEIGQNSVVFIDSLTRMTRAFNADIDSHGKTMSGGL
GANAMEFPRKIFGAARKLENGGSLTIIATILVDTGSRMDDIIFQEFKGTGNMDLHLSREC
AEHRIWPAININKSGTRKEDLLLDKEEHKKIIEIRRAITTKDEKDAMMEFISYLQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggttcaaggatatcttgaaatcatggataaagggtttggttttttaaggcag
attgaagaaaacttccagcccaaacctgaaaacacatatgtcccaaacagtttaatcaga
aaattaaacttaaaagaaggcagttttattgaaggatttggtgaacaaaaaggaccggcc
aatctgaatcttgctttaatacgtattgaaacgattaataagctgccctttgatgaattt
atcaacacccctctattgcaggatcaggtcagcataaacccttttgaacgctattattta
actcaggatgaagatgatattacaggcaaagccattgatctgattacacccattggaatg
gggcaaaggggattgattatttcaccgcccaaatccggcaaaacaaccatattaagacat
atggcaaactctatagtaatgaatcatccggatgccaaagtgtttgttctcctgattgat
gaaagacccgaagaagtaactgattttcaaaggggcctgaaagatgcccatgtactgtat
tcatcagcagaccagcaaataggtcagcatatgagaatgacacgcatcgccatgcatacg
gccatcagatgcgctgaaataggtcagaattcagttgtctttattgattcattaaccagg
atgacaagggcttttaacgctgatattgacagccatggcaaaaccatgagcggagggcta
ggtgccaatgccatggaatttcccagaaaaatttttggtgcggcaagaaagcttgaaaat
gggggttcactgaccattattgccaccatcctcgtggacaccggcagccgcatggatgac
attatctttcaggaattcaagggaaccggaaacatggacctgcacctttcccgggaatgc
gctgaacaccgaatctggccagccattaatatcaacaaatcaggaacaagaaaagaagac
cttttactggacaaggaagaacataaaaaaataattgaaattagaagagccatcaccaca
aaagatgaaaaagatgccatgatggaatttatatcatatcttcaataa
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