Desulfobacula toluolica: TOL2_C04640
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Entry
TOL2_C04640 CDS
T02268
Symbol
pnp
Name
(GenBank) Pnp: polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dto
Desulfobacula toluolica
Pathway
dto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL2_C04640 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dto03019
]
TOL2_C04640 (pnp)
03016 Transfer RNA biogenesis [BR:
dto03016
]
TOL2_C04640 (pnp)
Enzymes [BR:
dto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TOL2_C04640 (pnp)
Messenger RNA biogenesis [BR:
dto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TOL2_C04640 (pnp)
Transfer RNA biogenesis [BR:
dto03016
]
Prokaryotic type
tRNA degradation factors
TOL2_C04640 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
PCB_OB
OB_RRP5_4th
S1_2
S1_RRP5
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Cytokin_check_N
DUF8183
Motif
Other DBs
NCBI-ProteinID:
CCK78633
UniProt:
K0NFW4
LinkDB
All DBs
Position
556703..558790
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AA seq
695 aa
AA seq
DB search
METKFTTTINGKEFSISGGKIAKQASGSVIVQYGETIVLVTAVSSKDPKPDISFLPLTVE
YQEKIYSAGRIPGNYFRREIGRPSEKETLTARLIDRPIRPLFEDDYNYETQVIATVLSMD
KIHEPDTLAIAGASAALQISDIPFAGPIAGIKVGRINGQFVANPTIEEMEESDIELVVAG
SKTGVVMVEGGADIVSEKDMLDAIFFGHEAMQPIIDLQDQIKQAFGKEKRVFVPPARDEE
LIAEVIEYSKDKIYTQVQIKTKIERQNALSDLKNQVVEHFSQTYPEQTKDVKYAFSKCVK
KVSRDIVLKEDKRIDGRAFDEIRQITCEVGSLPRPHGSALFTRGETQVLGILTLGSGMDE
QRVETLMGNETRAFMLHYNFPAFSVGEVRRAGGPSRRDIGHGNLATRALQRVLPSPEEFE
YTIRLVGEVMESNGSSSMGTVCSGTLALMDGGVPIKAPVSGIAMGLVKDDNKTAVLSDIL
GDEDHFGDMDFKVAGTAEGITALQMDIKIKELSKEIMEKALNQANGGRIHILNKMLETLK
DAREDVSPHAPKIVSIQIKSDKIRDIIGPGGKVIRALQVETNTIIEVNDSGIVKIAAENE
EDAALALKMVSDIALDPEIGEIYEGTVVKITDFGAFVNIKQGTDGLVHISELANYRVKKV
TDVVKEGDVIPVKVLDVTRDGKIKLSYKATKTDEK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaaatttacaacaaccattaatggaaaagaattttcaattagtgggggaaaa
attgccaaacaggcatcaggatcagttattgtacaatatggagaaaccattgtattggtt
acggctgtttcatcaaaagatcctaaaccggacattagttttttacccttgactgttgaa
tatcaggaaaaaatatactcggcaggaagaattccaggcaattacttcaggcgggaaatc
ggcaggccttctgaaaaagaaaccttgacagcaagattgattgacagacctattcgtcct
ctttttgaggatgactacaattatgagacacaggttattgctactgttctttccatggac
aaaattcatgaacccgacacacttgccattgcaggagcgtctgctgctttacaaatttcc
gatattccctttgcaggacctattgccggtattaaagtcggtaggataaatggtcagttt
gttgcaaacccgacgattgaagagatggaagaaagtgatatagaactggttgtggccggt
tccaaaacaggtgtggtaatggtggaaggcggggcagatatcgtttctgaaaaagatatg
ctggatgctatattttttggtcatgaagcaatgcagcctatcatagatctgcaagatcag
ataaaacaagcttttggaaaagaaaaacgggtatttgtgcctcctgccagggacgaagaa
ttgattgctgaggtgatagaatattcaaaagataaaatttatacacaagttcaaatcaaa
acaaaaatagagcgccagaacgcactcagtgatttgaaaaatcaggtggttgaacatttt
tctcaaacctatcccgaacagaccaaagatgtaaaatatgcgttttctaaatgtgttaag
aaagtcagtcgtgatattgttttaaaagaggataaaaggattgacggcagggcctttgat
gagatcagacaaatcacatgtgaagttggaagtcttcccaggccccatgggtcagctctt
tttacacggggtgaaactcaggtcttgggtattttgaccctgggttccggcatggatgag
cagcgggttgaaactttaatgggaaatgaaaccagagcctttatgcttcattataatttt
cctgccttttcagtgggtgaagtaagacgtgcaggtggtccaagccgaagggatattggt
catggaaatcttgcgacccgtgcccttcaaagagttcttccttctcctgaagagtttgaa
tataccatccgtcttgtgggagaggtcatggaatccaatggaagttcgtccatgggaacc
gtatgttcaggaaccctggcattgatggatggtggtgttcccataaaagcaccggtttcc
gggattgccatggggcttgtaaaagatgacaataaaacagcagtgctttcagatattctg
ggagatgaagatcattttggtgatatggatttcaaggttgctggaactgctgaaggaatt
acagctctccagatggacataaagattaaggaactgtccaaagagatcatggaaaaagcc
cttaaccaggccaatggaggcagaattcatatcctgaataaaatgcttgaaactcttaag
gatgcaagagaagatgtttctcctcatgctcccaaaattgtcagcatccagattaaatcc
gataaaataagagacattatcggtcctggaggaaaagtgatcagggcccttcaggttgaa
accaataccatcattgaagtgaatgattcaggtatcgtcaaaattgctgcggaaaatgaa
gaagacgctgccctggctttgaaaatggtgtccgatattgcccttgatcctgagattggt
gagatctatgagggaacagttgttaaaattactgactttggtgcctttgtcaatatcaaa
cagggtactgacgggctggtccatatttcagaactggcaaattacagggtgaaaaaggta
acagacgtggttaaagagggcgatgtgatccctgtaaaggttctggatgttaccagggat
ggaaaaataaaactgagttacaaagcaacaaaaactgatgaaaaataa
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