Desulfobacula toluolica: TOL2_C11050
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Entry
TOL2_C11050 CDS
T02268
Symbol
uvrB
Name
(GenBank) UvrB: UvrABC system protein B (Excinuclease ABC subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
dto
Desulfobacula toluolica
Pathway
dto03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TOL2_C11050 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dto03400
]
TOL2_C11050 (uvrB)
DNA repair and recombination proteins [BR:
dto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TOL2_C11050 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TOL2_C11050 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_7
AAA_22
DUF87
Microtub_bd
TrwB_AAD_bind
nSTAND3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CCK79269
UniProt:
K0N562
LinkDB
All DBs
Position
1297411..1299402
Genome browser
AA seq
663 aa
AA seq
DB search
MGLFNLVSDFSPTGDQPGAIEYLSKGVLNNEKHQVLLGVTGSGKTFTMANIIASVEKPSL
IIAPNKTLAAQLYNEFKGLFPDNCVEYFVSYYDYYQPEAYLPSSDTYIQKDSSINEVIDK
MRHSATRSVLARKDVIVVASVSCIYGLGAPEDYLALRITLDVDQEISREKVLEEFVNIQY
TRNDTDFHRGVFRVRGDRVEIFPAYEEEKAVRIDFFGDTIEGICEIDPLKGDVLKRFDQM
VIYPASHYVTKQQTRQRAMKGIVEELKMRLEYFYSNNKLVEAQRLDERTRYDLEMLNEIG
YCNGIENYSRHLTGRKSGEPPPTLLDYMDEDFLLFFDESHISVSQLGAMYKADRSRKTTL
VEHGFRLPSAIDNRPLKFEEFRQKSPQVIYVSATPADYEMEKAMGMVAEQIVRPTGLLDP
EVEIRDAETQVDDLYEEIMKRVEAEERVLVTTLTKRMAEDLTDYYADLGIKVKYLHSDIA
TMERIDIIQDLRRGLFDVLIGINLLREGLDIPEVTLVAILDADKEGFLRSYRSFIQIFGR
AARNVYGRVIMYAQKKTASMNRAISETRRRQKIQKAYNEKHHIVPTTIKKQLNSADYSAR
ARVTVLEGSVNEDIKAYEAGELNLEDIVKDLEYKMKLAAENLEFEKAAEYRDKIKELMEI
QRF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggggttatttaatttagtttcagatttttctcccacaggcgatcagccgggtgccatt
gaatatctttcaaagggtgttttgaataatgaaaagcatcaggtattgttaggggtgacc
ggttccggcaagacatttaccatggcaaatattatcgcaagtgttgaaaaaccaagcctg
attatcgcccccaacaaaaccctggcagcccagttgtataacgaattcaaggggcttttc
ccggataattgtgtggaatattttgtttcctattatgactattatcagccggaagcttat
cttccttccagcgatacctatattcagaaggattcatccatcaatgaggttatagacaaa
atgcggcattctgccacacgatcggtgcttgccagaaaagacgtgattgtggtggccagc
gtatcctgcatttacggccttggagcgcccgaggattacctggctttaaggattacactg
gatgttgatcaggaaatttcacgggaaaaggtattggaggaatttgttaatatccagtat
acccgcaatgataccgattttcatcgcggggtgttcagggtcaggggagacagggttgaa
atttttcccgcttatgaagaagaaaaagcagtgcggattgattttttcggggatacaatt
gaaggcatttgtgaaattgatcccttaaaaggagatgtactcaagcgttttgaccagatg
gttatttatccggcctcccattatgtcaccaagcagcagacgcgtcaaagggccatgaaa
ggcattgttgaagagttgaaaatgaggcttgagtatttttacagtaacaacaagcttgtg
gaagcccagcgccttgatgaaagaacccggtatgatctggaaatgctcaatgaaataggc
tattgcaacggaattgaaaattattccaggcacctgaccgggcgtaaatcaggagagccg
ccgccaacacttctggattatatggatgaggactttttgcttttttttgatgaaagccat
atctctgtttcacagttaggtgccatgtacaaggctgaccggtcaagaaaaacaaccctt
gtggaacacggatttcgcctgccgtcagccatagacaaccgtccacttaaatttgaagaa
ttcagacaaaaaagtccccaggtgatttatgtgtctgccacacctgcagactatgagatg
gaaaaggcaatgggaatggtggccgaacagattgtacggccaacaggactgcttgaccct
gaggttgaaatcagggatgctgaaactcaggtggatgatctttatgaagagatcatgaaa
cgtgttgaagccgaagaacgggttcttgtaaccactttgaccaagagaatggcggaagat
ctgaccgattattatgcagatctggggataaaggtaaagtatcttcattcagatatcgct
acaatggaacgaattgatatcatacaggatcttcgcagaggattgtttgatgtgcttata
ggaatcaatcttctcagggaggggcttgatatcccggaagtcacacttgtggccatactt
gatgcggacaaagaaggctttttaaggtcttacaggtcctttatccagattttcggacgg
gctgccagaaatgtttacggaagggttatcatgtatgcccaaaaaaagaccgcgtccatg
aacagagccatttcagagacccggcggcggcaaaaaattcaaaaagcatataacgaaaag
caccatattgtgcccacaaccatcaaaaaacaactaaattcagctgattattctgccagg
gccagggtgactgttcttgaagggtctgtaaacgaagacattaaagcatatgaggcagga
gaattgaatttggaggatattgtcaaagatctggaatataaaatgaaactggcggctgaa
aaccttgagtttgaaaaagctgcagagtacagggataaaatcaaggaattgatggagata
caacgattttaa
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