Desulfobacula toluolica: TOL2_C13630
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Entry
TOL2_C13630 CDS
T02268
Symbol
sbcB
Name
(GenBank) SbcB: exodeoxyribonclease I (exonuclease I)
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
dto
Desulfobacula toluolica
Pathway
dto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TOL2_C13630 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dto03400
]
TOL2_C13630 (sbcB)
Enzymes [BR:
dto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
TOL2_C13630 (sbcB)
DNA repair and recombination proteins [BR:
dto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TOL2_C13630 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TOL2_C13630 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TOL2_C13630 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Exonuc_X-T_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CCK79526
UniProt:
K0NEN0
LinkDB
All DBs
Position
1599988..1601436
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AA seq
482 aa
AA seq
DB search
MKNKMKTFLFYDIETSGLNPAFDQILTFAFIRTDFGLNEMDRQTITIRLRKDIVPSPKAF
LTHGLTYDELEHGVSEYEAALKIHNILNTPGTISLGYNSLGFDDIFLRFLFYRNLLDPYL
HQYANGCYRMDVLPITAVFRVFYPSCLKWPCVDGKPSLKLDLICSENRFVTSGRAHEAMN
DVEAVIELVRRLILQKDIWKYCLGFFNKTRDEIRISSIEKTFDIQSERFSVCLMVSASFG
AGKNYLVPVIRLGESRVYNNQSLWLRLDSDDIIGLGTDKDLKDTFVIRKRPGDALIVLPA
LERFWTKLPEASQQSADENMDKIRRHQERFLEFIEYHCRYEYPFVPDIDPDAALYQDGFF
SALEKKQSDLFHKAANNRKKEVLQKIQSPRIKVLAGRIFDRNFKDEAEQSKDSEYHFYLN
RLRSSLPEDQFVGYKNDIKFNCEQGMRELKEVENDLLSLNPDQKKMFGWLKEYIMNLSIP
PA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaaatgaaaacctttttgttctatgatattgaaacaagtggtttaaatcct
gcatttgatcagattttaacgtttgcttttatccggactgattttggactcaatgaaatg
gacaggcaaaccattactattcggttgcgtaaagatattgtgccgtcgccaaaagctttt
ttaacgcacggtttgacttacgatgaattagaacatggggtcagtgaatatgaagcagct
ttaaaaattcataacatattaaacacaccgggcacgataagtctggggtacaattctctt
ggttttgatgatatttttttaaggtttcttttttatcgaaatcttttagatccctacttg
catcaatatgctaatgggtgctacaggatggatgttctgcctattacggctgtcttcagg
gtattttatccatcttgtttgaagtggccttgtgttgatggaaaaccaagccttaaactt
gatttgatttgttctgaaaacaggtttgtcacttccggcagggctcatgaagcaatgaat
gatgttgaggctgtcattgagcttgtcaggagattgattcttcagaaggacatttggaaa
tattgtcttggattttttaataaaacccgggatgaaatcaggataagtagcattgaaaaa
acttttgatattcaatcagagcgtttcagtgtttgtcttatggtttcggcatcttttggg
gccggtaaaaattacctggtgcctgttatccgtcttggagaatcaagggtgtataacaat
caaagtctttggttgcgacttgattcagacgatattataggtcttggtacggataaggat
ttgaaggatacgtttgttataagaaaacgtcccggagatgcattgatcgtattgcctgcc
cttgaaagattttggacaaaattgccggaggcttcacaacaatcagctgatgaaaatatg
gataaaattcgccgtcaccaggaaagatttttggaatttatcgagtaccattgcagatat
gaatatccttttgtgcccgacatagacccggacgcagcgctttaccaggatggttttttt
tccgcgcttgagaaaaaacaaagcgatttgtttcataaggctgcgaacaaccggaaaaaa
gaagtcttacaaaaaattcaaagccccaggataaaagttttagccggtcgtatttttgac
aggaatttcaaagatgaagcagaacaatcaaaagatagtgaatatcatttttatttgaac
agattaagatcttctttgcctgaagatcagttcgtcggctataaaaacgatataaaattt
aattgtgaacaagggatgcgggaattaaaggaagttgaaaatgatcttttgagtcttaat
ccggaccaaaaaaagatgtttggatggttaaaagagtatataatgaatttatcaattcct
cctgcttag
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