Desulfobacula toluolica: TOL2_C23620
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Entry
TOL2_C23620 CDS
T02268
Symbol
rhlE2
Name
(GenBank) RhlE2: predicted ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dto
Desulfobacula toluolica
Pathway
dto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL2_C23620 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dto03019
]
TOL2_C23620 (rhlE2)
Enzymes [BR:
dto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOL2_C23620 (rhlE2)
Messenger RNA biogenesis [BR:
dto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TOL2_C23620 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
CCK80523
UniProt:
K0NKR4
LinkDB
All DBs
Position
2760757..2762076
Genome browser
AA seq
439 aa
AA seq
DB search
MSFDELGLRVELLKASKSKGYTAPTPIQTRAIPAILNGRDILARAQTGTGKTDAFALPLI
EILSRKKVKRRYPRALVLTPTRELALQVGESIKAYARRVSIRCTVVYGGVNITPQIDRLK
RGIDILVATPGRLLDLASHRDLDLSRIEFLVFDEADRMLDLGFSEEISEILEFVPTERRT
MLFSATYTQQIRNLAQIMLQEPDYIEVTPSNTAAESIVQKVHLVDKPNKRALLIHLITTG
HWTQILVFVRTKHGANKLTEKLVAKGISAAALHGNKSQSFRTRTLKEFKNGVIRTLVATD
VAARGLDISNLPYVVNYDIPSVPEDYIHRIGRTGRAGVSGIAVSLVSPDERPHLKAIEKL
LKQKIPKEPIDHYTMDGTVPDFVLLRPNNPSSEKKADKQIKEIVNKRKASKQRSQTPAGK
ARSKSRSGRKKHITKKSGF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgatgaacttggccttcgggtcgaattgcttaaagcctcaaaatccaagggt
tataccgcccccacacccattcagacccgggccattccggcgattctcaacggacgggac
attcttgcacgcgctcagacaggaacgggaaaaacagacgcatttgccctcccactgatt
gaaatcctgagccgtaaaaaagtcaaacggcgatacccaagggcccttgtcctgacacca
accagagagcttgcactacaggtgggagaaagcatcaaggcctatgccagacgagtatcc
attcgatgcaccgtggtttacggcggggttaacataacgccacagattgatcgactgaag
cgcggcattgatatccttgtggccacaccaggacgtcttctggatcttgccagccacaga
gacctggatctttccagaatagaatttctggtgtttgacgaggccgacagaatgctggat
cttggattcagtgaagagatttccgaaatccttgagtttgttccgactgaacgcaggacc
atgctgttttcagccacctatacacaacagatccgaaatcttgcccaaataatgcttcag
gaaccagactatatagaggtgacacccagcaataccgcagcagaatcaattgttcagaag
gttcacctggtggacaaacccaataaacgcgcactgctcatacatctgatcaccactgga
cactggacccaaatactggtctttgtccgcacaaaacacggggcaaacaaactcacggag
aaacttgtcgcaaaagggatcagtgctgctgccctgcacggcaacaagagccagtctttc
aggacacgcaccctcaaagaattcaaaaacggtgtaatccgcaccctcgtggcaacggat
gtggctgcaagaggtcttgacatcagcaatctaccctatgttgtcaattacgatataccg
agtgtaccagaggattatattcaccgcatcggacgcaccggtcgcgcaggcgtaagcggt
attgctgtctcactggtcagtcctgatgagagacctcatcttaaagctattgaaaaactg
ctgaagcaaaagatcccaaaggaaccgattgaccactacaccatggatggcacagttccg
gattttgtcctattgcgccccaacaacccgtccagcgaaaaaaaggcagacaaacaaata
aaagagattgtcaacaaaagaaaagcctcaaaacagcgttctcaaacacctgccgggaaa
gcaagatcaaaatcccgatccggcagaaaaaaacacatcacaaaaaaaagcggtttctaa
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