Desulfobacula toluolica: TOL2_C29610
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Entry
TOL2_C29610 CDS
T02268
Symbol
rapA
Name
(GenBank) RapA: RNA polymerase-associated protein A
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
dto
Desulfobacula toluolica
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dto03021
]
TOL2_C29610 (rapA)
Transcription machinery [BR:
dto03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
TOL2_C29610 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
Tudor_RapA
ResIII
DEAD
DUF2913
AAA_22
Gp38_N
DUF4094
Motif
Other DBs
NCBI-ProteinID:
CCK81120
UniProt:
K0NJV0
LinkDB
All DBs
Position
3491559..3494249
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AA seq
896 aa
AA seq
DB search
MHQFITGQRWISQAEPELGLGTLIKVNDRTISIRFDSSDCTRQYSLQSAPLKRVVFKPGD
EIQLKDNKKLIVQTLSESEGLIYYSGKETIVCEKDLCDTISFSMPQDRLFAGITDSSKLF
DLRYRLLKAKADYDASMVKGFLGGQVELIPHQFFIADKVTTRYIPRVLLSDETGLGKTIE
ACLILHKLLITHRAQRVLIVVPESLVHQWFIELYRKFNLSFMIFDADWCESLEQESSRTN
PFLNRQMGIVSINFLKNKKRQTQIIKAGWDMVVIDEAHHITDDKKTYEFIQTLARTTFGL
MLLTATPEQMGIKNHFLHLQLLDPERYFDFNTYLDETSQYKKTIHTVTQLIKKEKNTDHI
LDSYGPGRVIFRNKRDVIKDFPKRVAHLKPLAATISQIKAANREFFDTNETKAHVFSDDP
RISCLVELIKQKKKLLVICSSKEKVNAIAKAVANHIFVDVAKFDETMSLLQRDRNAAWFS
RKDGARILICSEIGSEGRNFQFVHHLFLFDLPHNPELLEQRIGRVDRIGQKSDIQIHVPY
ILGSVYEILARWYMDGLNLFAGNINGSHLIYEKFKPNLFDLFSRSAESAAVKAFVLEKLI
EETKAYCIKVDKKLAHGKNILLEMNSFKPESAKKIIDHITRTEKNNAFDDLLTMVLDHYG
IEIDFIDKTIFKLNSTTMTDEKFPALTSLSNAMTFNRKTAIARDDIDFFSWDHPFVQQTF
EYFITNDTGSCATALLNRQQGPGILLETIFILECIAPGNLNMERYLMPHPIRIIVDHEGR
DTSLDNKFTSLSSKLKKDQSTWFMDMEPVKQVLIPSMIEKSVSIAENHCEKMIKKGQNRI
KDILGKEITRLMQLQKINPDIRTAEIKLARNRMESLLKYLDTSRLRMDAVRLIRVQ
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaattcattacaggccagagatggatcagccaggcagaacctgagctgggttta
ggaacccttattaaggttaatgacagaacaatatccattaggtttgattcaagtgactgc
acccggcaatattcactccaatccgcgcccctaaagcgcgttgttttcaaacccggagat
gagattcaattaaaagacaataaaaaactgatcgtccaaactctgtcggaatcagaaggg
ctaatctattattcaggaaaagaaaccattgtttgtgaaaaagacctgtgtgatacgatt
tcattttccatgccccaggaccggctttttgccgggatcacagattccagcaaactgttt
gatttgaggtacaggctgttaaaggccaaagctgactatgacgcatccatggtaaaaggg
tttttgggtggccaggtggaactgatcccccaccagtttttcattgcagacaaggtaacc
acacggtatattccaagggttttgctctccgatgaaacaggcctgggtaaaaccatcgaa
gcatgccttattctccataaactgctcataacccacagggcgcaaagggtattgattgtt
gtcccggaatccctggttcaccaatggtttatcgaattgtaccgcaaattcaacctgtct
ttcatgatatttgatgcagactggtgcgaaagccttgaacaggaaagctcaagaacaaat
ccttttttgaaccggcaaatgggtattgtcagcataaattttcttaaaaacaaaaaacgc
cagacacaaatcattaaggcgggttgggacatggttgtcattgacgaggcccaccatatt
acggacgataaaaaaacctatgaatttattcaaacacttgccagaacaacattcggtttg
atgctgctgacagccacaccggaacagatgggaattaaaaatcattttcttcatcttcaa
ctgcttgatccggaacggtattttgattttaacacctaccttgatgaaaccagccagtat
aaaaaaaccatccatacggtcacacaattgataaaaaaagagaaaaatacggatcacatt
cttgattcctatggtcccggcagggtaatttttcgaaacaaaagagatgtgatcaaagat
tttcccaaacgagtggcccatttaaaaccccttgcggcaacaatctctcaaataaaggct
gcaaaccgggaattttttgataccaacgagaccaaggctcatgtattctcggatgaccca
agaatatcctgcctggttgaattgataaaacaaaaaaagaagctcctggtgatttgcagt
tctaaagagaaggtaaacgccattgcaaaagctgttgcaaaccatatttttgttgatgtg
gccaaatttgatgaaaccatgagtcttttacagcgggacagaaatgctgcctggttttcc
agaaaagacggcgcaagaattcttatctgttctgaaatcggcagtgagggaagaaatttc
cagtttgtgcatcacctgttcttatttgacctgccccacaacccggaacttttagagcag
cgaataggaagggttgacaggatcggccagaaaagcgatatccaaattcatgtaccctat
atccttggaagtgtttatgaaatcctggcacgatggtatatggacggcttgaacctgttt
gccggaaacatcaacggaagtcatttgatctatgaaaaattcaaaccaaatcttttcgac
cttttcagccgctcggcagaatcagctgctgttaaagcatttgtattggaaaaattgatt
gaagaaacaaaggcctattgcatcaaagtggacaaaaaacttgcccatggtaaaaacatc
ctgcttgaaatgaattcatttaaaccggaatctgctaaaaaaatcattgaccatatcacc
cggacagaaaaaaacaatgcttttgacgatcttttgaccatggttctggatcattatggc
attgaaattgattttattgacaaaaccatcttcaaactgaattcaaccaccatgacggac
gaaaaattcccggcactgacaagcctttccaatgcaatgacatttaacagaaaaacagcc
attgccagggatgatattgattttttctcctgggatcacccttttgtccaacagaccttt
gaatattttatcaccaatgatacaggttcttgtgcaacagctcttttaaacaggcagcaa
ggtccggggattttactggaaacaattttcatactggaatgtattgctcccggaaatttg
aacatggaaagatatttaatgccccatcccattcgcattattgtggatcatgaaggccgt
gacaccagtttggacaataaatttacaagtctttcaagcaaactgaaaaaggatcaaagc
acctggttcatggacatggaaccggtaaagcaggtactgatcccttccatgattgaaaaa
agtgtttcaattgccgaaaatcattgtgaaaagatgataaaaaaaggacaaaaccggata
aaagatatccttggcaaagagattacccggcttatgcaattacaaaaaataaatcccgat
ataagaacagcggaaatcaaacttgcccggaaccgtatggaatctcttttaaaatatctg
gacacatcccggctcaggatggatgcagtaagactgatccgcgttcaatag
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